RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Q9DA42 136 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fn3kQ9ER35 309 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cts6Q9ET52 334 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm16432A0A0A6YXX9 775 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fam71f2B2RXB0 297 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp715G3X9T1 886 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lef1P27782 397 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Apoc3P33622 99 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rln1P47932 185 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 NacaP70670 2187 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Irgm1Q60766 409 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 CcnhQ61458 323 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ddhd2Q80Y98 699 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cldn17Q8BXA6 224 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Casc3Q8K3W3 698 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc27a4Q91VE0 643 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 GlyatQ91XE0 296 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnaset2aC0HKG5 259 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnaset2bC0HKG6 259 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pcdh10E9PXQ7 1057 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr605E9Q838 314 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Socs5O54928 536 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ntrk2P15209 821 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gmeb2P58929 530 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cpne2P59108 548 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Prr27Q3SYJ2 352 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr464Q5SW48 313 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc22a6Q8VC69 545 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lipt1Q8VCM4 373 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc22a7Q91WU2 540 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr930Q9EQ99 308 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zar1lC3VD30 291 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 UncxO08934 530 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd3gP11942 182 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Wdr20Q3UWE6 569 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ckmt2Q6P8J7 419 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rps27lQ6ZWY3 84 aaKnown RBP11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr516Q8VFZ5 314 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn1r69Q8VIC1 319 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ptgr1Q91YR9 329 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc9a3r2Q9JHL1 337 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fbxo6Q9QZN4 295 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 RngttO55236 597 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cyp1a2P00186 513 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc30a2Q2HJ10 371 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pde12Q3TIU4 608 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc22a15Q504N2 544 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1051Q7TR76 308 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Poc1bQ8BHD1 476 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mgat4cQ9D306 478 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rgs20Q9QZB1 239 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Scn3aA2ASI5 1947 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 A0A286YDG0 184 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm10376D3YXI8 184 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm3685J3QPP2 205 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hmgn1P18608 96 aaKnown RBP11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Grb10Q60760 621 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fem1abQ8C0T1 654 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 EndovQ8C9A2 338 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr380Q8VGT3 311 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pink1Q99MQ3 580 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ccdc107Q9DCC3 242 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nme7Q9QXL8 395 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fem1aaQ9Z2G1 654 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Trpm3Q5F4S9 1721 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kbtbd7G5E8C2 690 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 TyrobpO54885 114 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rras2P62071 204 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 CtseP70269 397 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm1123Q1RME4 390 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 CenptQ3TJM4 515 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pum2Q80U58 1066 aaKnown RBP11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Q8R3C1 574 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr970Q8VFN3 311 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 HpgdsQ9JHF7 199 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Enpp1P06802 906 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnf215Q5SPX3 379 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr58Q7TRF6 309 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr714Q7TRN0 317 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Otop1Q80VM9 600 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kremen2Q8K1S7 461 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr133Q8VG94 312 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnf111Q99ML9 989 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Toe1Q9D2E2 511 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zdhhc4Q9D6H5 343 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 P33monoxQ9DBN4 303 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sntb2Q61235 520 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gsto2Q8K2Q2 248 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dhrs7bQ99J47 323 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 C3P01027 1663 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r-ps130A0A140T8U3 855 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Omt2aF6ZJR3 104 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r65G3X931 845 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gal3st2cQ3ULK5 396 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Commd3Q63829 195 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 TCAIMQ66JZ4 499 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp748Q7TPL6 888 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr320Q7TRZ4 306 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dnajc27Q8CFP6 273 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rgs6Q9Z2H2 472 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms