RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Padi6Q8K3V4 682 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr599Q8VG01 315 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Vsx1Q91V10 363 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Lrch4Q921G6 680 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ceacam2Q925P2 520 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Fam45aQ9D8N2 357 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Osbpl3Q9DBS9 855 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Pard6gQ9JK84 382 aa9.28□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ndor1A2AI05 598 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm20547B8JJN0 1276 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm3149E9PW52 257 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr605E9Q838 314 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Galnt9G3X942 604 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Gm8362K7N6Y6 257 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 P01648 108 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 CfbP04186 761 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 CatP24270 527 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Rpl3P27659 403 aaKnown RBP9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 ArntP53762 791 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Orm1Q60590 207 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nr2f1Q60632 422 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PdgfrlQ6PE55 375 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr728Q7TRM6 311 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Q80Y39 304 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Zc3hc1Q80YV2 501 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Arhgap22Q8BL80 702 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PstkQ8BP74 359 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ugt2a3Q8BWQ1 534 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 PpcdcQ8BZB2 204 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Slc22a12Q8CFZ5 553 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 FgbQ8K0E8 481 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Nmral1Q8K2T1 309 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Hus1bQ8K572 276 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ptcd2Q8R3K3 381 aaKnown RBP9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ogfrl1Q8VE52 464 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Paip1Q8VE62 400 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Ccdc71Q8VEG0 433 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr1052Q8VGR8 312 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Olfr649Q8VGW1 312 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 HraslsQ9QZU4 167 aa9.27□□□□□ -0.92
Ccdc40-202ENSMUST00000053440 Trav1A0A075B5Z4 110 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm13283A0A087WPG5 182 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm28557A0A087WQQ0 336 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc9a5B2RXE2 898 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tcp10cE9Q046 482 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kcnmb3E9Q7U0 239 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc27a6E9Q9W4 619 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn1r27K7N688 303 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 SnrpgP62309 76 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tgm3Q08189 693 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Entpd7Q3TCT4 606 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sdc3Q64519 442 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Elfn2Q68FM6 823 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fam46bQ8C152 427 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cdc123Q8CII2 336 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bloc1s5Q8R015 185 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmem106aQ8VC04 261 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfyve21Q8VCM3 234 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ugt2b37Q8VCN3 530 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PpcsQ8VDG5 311 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1391Q8VFA4 311 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pfdn1Q9CWM4 122 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Trim13Q9CYB0 407 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Erp27Q9D8U3 272 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cdrt4Q9DA64 179 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ClpxQ9JHS4 634 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kcnj10Q9JM63 379 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Spry1Q9QXV9 313 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Trpm6Q8CIR4 2028 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Skint2A7XUX6 400 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm14744B1AVU4 173 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PtprhE9Q0N2 971 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gcm2O09102 504 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Stmn3O70166 180 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cyp17a1P27786 507 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cct3P80318 545 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Il12rb2P97378 874 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bcl2a1cQ0P538 128 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rab42Q0PD08 215 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm732Q3V0P9 516 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dvl3Q61062 716 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bdkrb1Q61125 334 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Meig1Q61845 88 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Glt8d2Q640P4 349 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Q6P1I3 445 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sra1Q80VJ2 232 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rae1Q8C570 368 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Teddm1bQ8CC62 306 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ppwd1Q8CEC6 646 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr45Q8VGM1 311 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pcdhac1Q91Y10 964 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Myl9Q9CQ19 172 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Atp5dQ9D3D9 168 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fam174aQ9D3L0 190 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 5430402E10RikQ9D3N5 173 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Med27Q9DB40 311 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 SrpraQ9DBG7 636 aaKnown RBP9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Trappc4Q9ES56 219 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mapk11Q9WUI1 364 aa9.27□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hey1Q9WV93 299 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms