RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cped1B2RX70 1026 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Kcne1P23299 129 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Pcmt1P23506 227 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Taar7dQ5QD10 358 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 4930438A08RikQ5SPH3 536 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Phf12Q5SPL2 1003 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 MuskQ61006 868 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Zc3hc1Q80YV2 501 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Slc43a2Q8CGA3 568 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Vmn1r30Q8R2D2 302 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Utp4Q8R2N2 686 aaKnown RBP8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Pex13Q9D0K1 405 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Cldn6Q9Z262 219 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 PtgdsO09114 189 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Cmklr1P97468 371 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Map4k2Q61161 821 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Pum2Q80U58 1066 aaKnown RBP8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Bend7Q8BSV3 434 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 IlvblQ8BU33 632 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Znf322Q8BZ89 410 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Yod1Q8CB27 343 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Foxe1Q8R2I0 371 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Exosc7Q9D0M0 291 aaKnown RBP8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Sp2Q9D2H6 612 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f15A0A087WR44 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f12A0A0A0MQP3 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Gm29797A0A140LIA7 188 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f9A2BFZ7 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f7A2BHG6 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f19A2CG71 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f10A2CG92 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f3A2CGC2 496 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f13B8JKF6 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f2J3QMS5 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f25J3QMV9 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f6J3QMW9 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Gm21972J3QN38 98 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f26J3QNK2 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f24J3QNQ5 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f8J3QQ50 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Olfr1249L7MU51 318 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f17L7MU81 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f18L7MU83 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Tssk2O54863 358 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Arl6O88848 186 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Best1O88870 551 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Tmco2P0C1V4 183 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 SgcgP82348 291 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Col19a1Q0VF58 1136 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f14Q1LZI5 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Ccser2Q3UHI0 833 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Btbd35f27Q5FWA1 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Ptpn18Q61152 453 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Trim46Q7TNM2 759 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Ttc29Q80VM3 471 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Slc38a9Q8BGD6 560 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Slc35d3Q8BGF8 422 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Fbxl4Q8BH70 621 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Hmbox1Q8BJA3 419 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 TbceQ8CIV8 524 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 SdslQ8R238 329 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Olfr1122Q8VGT9 326 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 GMCL1P1Q99N64 498 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Cmtm6Q9CZ69 183 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Khdrbs3Q9R226 346 aaKnown RBP8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Mbd4Q9Z2D7 554 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Zfp981A2A8V7 445 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Gm17555F6U8B9 371 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Gm20695H3BLK7 282 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Zfp37P17141 594 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Wnt3P17553 355 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Slc17a4Q5NCM1 492 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Tlx2Q61663 284 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Peli2Q8BST6 419 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Pcdhb20Q91XZ9 799 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Mrpl37Q921S7 423 aaKnown RBP8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Pbx4Q99NE9 378 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Rbm18Q9CR83 190 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Smurf1Q9CUN6 731 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 PrelpQ9JK53 378 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 SpastQ9QYY8 614 aa8.04□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Olfr1375A0A0N4SUP0 313 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Gm13078A2AGW8 474 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Chrna10B2RX82 447 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Hpse2B2RY83 592 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Olfr605E9Q838 314 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 EmdO08579 259 aaKnown RBP8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 C1qbP14106 253 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Ybx1P62960 322 aaKnown RBP8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 DhpsQ3TXU5 369 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Q3UST5 385 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Ephx3Q3V1F8 367 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Tmem255bQ5FW56 369 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Olfr1307Q7TQX1 312 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Colec10Q8CF98 277 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Zdhhc5Q8VDZ4 715 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 AassQ99K67 926 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Mzt2Q9CQ25 159 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Plscr1Q9JJ00 328 aa8.03□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Zfp937A2ANU7 503 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms