RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 DND1Q8IYX4 353 aaKnown RBP16.24■□□□□ 0.19
PNKP-230ENST00000638016 CA5BP1Q8WTZ4 195 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 HGDQ93099 445 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 OMA1Q96E52 524 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 ZNF597Q96LX8 424 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 GNRHR2Q96P88 292 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 MECRQ9BV79 373 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 GATA5Q9BWX5 397 aaPredicted RBP16.24■□□□□ 0.19
PNKP-230ENST00000638016 GALNT9Q9HCQ5 603 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 SLC35C2Q9NQQ7 365 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 SLC17A7Q9P2U7 560 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 PSME2Q9UL46 239 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 CCL27Q9Y4X3 112 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 HCFC1P51610 2035 aa16.24■□□□□ 0.19
PNKP-230ENST00000638016 CSMD2Q7Z408 3487 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 SERTM1A2A2V5 107 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 KDM4EB2RXH2 506 aaPredicted RBP16.23■□□□□ 0.19
PNKP-230ENST00000638016 GNB5O14775 395 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 UGT2B11O75310 529 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 CRCPO75575 148 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 CHRNGP07510 517 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 DRD2P14416 443 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 COX6B1P14854 86 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 CREB1P16220 341 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ACVR2AP27037 513 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 PTGDSP41222 190 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 CASP3P42574 277 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 NRG3P56975 720 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ZNF763Q0D2J5 394 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 C2orf80Q0P641 193 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 PLCXD2Q0VAA5 305 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 TRABD2AQ86V40 505 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 BANPQ8N9N5 519 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 C17orf47Q8NEP4 570 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 OR7G2Q8NG99 324 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 OR2T11Q8NH01 316 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 RDH11Q8TC12 318 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ZNF675Q8TD23 568 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 AENQ8WTP8 325 aaKnown RBP16.23■□□□□ 0.19
PNKP-230ENST00000638016 ZBTB9Q96C00 473 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 APOPT1Q96IL0 206 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 LCORQ96JN0 433 aaPredicted RBP16.23■□□□□ 0.19
PNKP-230ENST00000638016 EGLN2Q96KS0 407 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ANGPTL4Q9BY76 406 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 TRIM8Q9BZR9 551 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 PPCSQ9HAB8 311 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 CHST11Q9NPF2 352 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ALKBH4Q9NXW9 302 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ACAD8Q9UKU7 415 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 APCP25054 2843 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 MYO9AB2RTY4 2548 aa16.23■□□□□ 0.19
PNKP-230ENST00000638016 ARHGAP21Q5T5U3 1957 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 OR14I1A6ND48 311 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 C17orf51A8MQB3 221 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TMEM233B4DJY2 109 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TP53I11O14683 189 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 BCKDKO14874 412 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 SUSD5O60279 629 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 PPM1BO75688 479 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 JUNP05412 331 aaKnown RBP16.22■□□□□ 0.19
PNKP-230ENST00000638016 NUDT17P0C025 328 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TACR1P25103 407 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 WNT3P56703 355 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 HEPACAMQ14CZ8 416 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 FAM71E1Q6IPT2 247 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 NPSR1Q6W5P4 371 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TRIM46Q7Z4K8 759 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 LURAP1LQ8IV03 231 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 ZNF295-AS1Q8N0V1 137 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.22■□□□□ 0.19
PNKP-230ENST00000638016 RND1Q92730 232 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TMBIM1Q969X1 311 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 NTNG2Q96CW9 530 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 FAM111AQ96PZ2 611 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 UBQLN3Q9H347 655 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 TUBB1Q9H4B7 451 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 SIRT5Q9NXA8 310 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 COQ3Q9NZJ6 369 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 SLC6A5Q9Y345 797 aa16.22■□□□□ 0.19
PNKP-230ENST00000638016 DCHS2Q6V1P9 2916 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 CCDC151A5D8V7 595 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 ANKRD33BA6NCL7 494 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 CAPN14A8MX76 684 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 HCN1O60741 890 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 TRAPPC6AO75865 159 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 GLI4P10075 376 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 DDCP20711 480 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 ADH7P40394 386 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 MASP1P48740 699 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 TMED10P49755 219 aaKnown RBP16.21■□□□□ 0.19
PNKP-230ENST00000638016 KIAA0040Q15053 153 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 CEBPEQ15744 281 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 TMEM198Q66K66 360 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 ANKRD26P1Q6NSI1 321 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 ZCCHC23Q6ZST2 131 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 WDR53Q7Z5U6 358 aaPredicted RBP16.21■□□□□ 0.19
PNKP-230ENST00000638016 FAM9CQ8IZT9 166 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 EID3Q8N140 333 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms