RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF441Q8N8Z8 693 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 NUP43Q8NFH3 380 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 GTF2H4Q92759 462 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 MOAP1Q96BY2 351 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 ZNF354BQ96LW1 612 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 PANX1Q96RD7 426 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 GAL3ST4Q96RP7 486 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 SMAD5Q99717 465 aaKnown RBP14.83□□□□□ -0.04
CLN6-216ENST00000636876 MYLK2Q9H1R3 596 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 CDCP1Q9H5V8 836 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 ZCCHC3Q9NUD5 404 aaKnown RBP14.83□□□□□ -0.04
CLN6-216ENST00000636876 TEKT2Q9UIF3 430 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 DTX4Q9Y2E6 619 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 BOD1L1Q8NFC6 3051 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 TLN1Q9Y490 2541 aaKnown RBP14.83□□□□□ -0.04
CLN6-216ENST00000636876 C2orf92A0A1B0GVN3 265 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 A0A1W2PP18 115 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 RFXANKO14593 260 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 MAN1A2O60476 641 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 NME6O75414 186 aaPredicted RBP14.82□□□□□ -0.04
CLN6-216ENST00000636876 ALPPP05187 535 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 FAM87AP0C7U9 286 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 CDKN2CP42773 168 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 TRPC1P48995 793 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 PRKAG1P54619 331 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ZNF155Q12901 538 aaPredicted RBP14.82□□□□□ -0.04
CLN6-216ENST00000636876 KCNAB2Q13303 367 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 GAB1Q13480 694 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 MEP1AQ16819 746 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ABHD17BQ5VST6 288 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 HLA-DQA1Q5Y7H0 255 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 SLC2A7Q6PXP3 512 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 C16orf47Q6ZP98 133 aaPredicted RBP14.82□□□□□ -0.04
CLN6-216ENST00000636876 SZRD1Q7Z422 152 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 CCDC197Q8NCU1 140 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 OR56A1Q8NGH5 318 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 BCAS4Q8TDM0 211 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ADIPOR1Q96A54 375 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 VSTM2LQ96N03 204 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 MS4A4EQ96PG1 132 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ARHGAP9Q9BRR9 750 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ITPAQ9BY32 194 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 LIN28AQ9H9Z2 209 aaKnown RBP14.82□□□□□ -0.04
CLN6-216ENST00000636876 FOLH1BQ9HBA9 442 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 MYOTQ9UBF9 498 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 VPS4AQ9UN37 437 aa14.82□□□□□ -0.04
CLN6-216ENST00000636876 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 RNF103-CHMP3A0A140T963 221 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 WWP2O00308 870 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 DCTN3O75935 186 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 UQCRC2P22695 453 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 PPICP45877 212 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 DCAF7P61962 342 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 MFAP5Q13361 173 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 TP53BP2Q13625 1128 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 MAPRE2Q15555 327 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 PAGE3Q5JUK9 113 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 C6orf10Q5SRN2 563 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 MFSD12Q6NUT3 480 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 LINC00696Q6ZRV3 163 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 C17orf47Q8NEP4 570 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 OR5AK3PQ8NH89 298 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 TP53INP1Q96A56 240 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 GIMAP5Q96F15 307 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 BTBD9Q96Q07 612 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 LMF1Q96S06 567 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 CCDC106Q9BWC9 280 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 EQTNQ9NQ60 294 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 TUBD1Q9UJT1 453 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 LEF1Q9UJU2 399 aaPredicted RBP14.81□□□□□ -0.04
CLN6-216ENST00000636876 YARS2Q9Y2Z4 477 aaKnown RBP14.81□□□□□ -0.04
CLN6-216ENST00000636876 PCDHGB7Q9Y5F8 929 aa14.81□□□□□ -0.04
CLN6-216ENST00000636876 CPAMD8Q8IZJ3 1885 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 A0A096LPI6 279 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 ANGPT2O15123 496 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 ERN1O75460 977 aaKnown RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 ITGA10O75578 1167 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 OR2J2O76002 312 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 GSNP06396 782 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 ZCCHC18P0CG32 403 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 DRD5P21918 477 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 PTPN6P29350 595 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 NR0B1P51843 470 aaKnown RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 PIGGQ5H8A4 983 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 BHLHB9Q6PI77 547 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 IGFL2Q6UWQ7 119 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 DNAJC14Q6Y2X3 702 aaPredicted RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 ZNF621Q6ZSS3 439 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 RETREG3Q86VR2 466 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 SNX32Q86XE0 403 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 TREML1Q86YW5 311 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 BEST3Q8N1M1 668 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 CLEC4FQ8N1N0 589 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 TRIML2Q8N7C3 387 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 HOXB13Q92826 284 aaPredicted RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 ABHD17AQ96GS6 310 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 LCORQ96JN0 433 aaPredicted RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 PHF12Q96QT6 1004 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms