RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 ACTC1P68032 377 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ACTA1P68133 377 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 TAP2Q03519 686 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 GALNT1Q10472 559 aaPredicted RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 KCNAB2Q13303 367 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ARSKQ6UWY0 536 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 OR7G3Q8NG95 312 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 OR52E2Q8NGJ4 325 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 OR2T4Q8NH00 348 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 FUBP1Q96AE4 644 aaKnown RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 TRIM43Q96BQ3 446 aaPredicted RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 FBXL8Q96CD0 374 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 SERINC2Q96SA4 455 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ENAMQ9NRM1 1142 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF226Q9NYT6 803 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 RNF6Q9Y252 685 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 KCNIP3Q9Y2W7 256 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 SCAMP2O15127 329 aaKnown RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF888P0CJ79 500 aaPredicted RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 ACVR1BP36896 505 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 CNEP1R1Q8N9A8 125 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 FIZ1Q96SL8 496 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 MACROD1Q9BQ69 325 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 MTHFD2LQ9H903 347 aaPredicted RBP13.44□□□□□ -0.26
UBE3A-220ENST00000630424 C2orf42Q9NWW7 574 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 EURLQ9NYK6 297 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 CPNE7Q9UBL6 633 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 RNF215Q9Y6U7 377 aa13.44□□□□□ -0.26
UBE3A-220ENST00000630424 EIF3FO00303 357 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 YY2O15391 372 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CD79AP11912 226 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 GSTM2P28161 218 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ERVFC1P60507 584 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 MRPS21P82921 87 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 IRF4Q15306 451 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CTC1Q2NKJ3 1217 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CDHR3Q6ZTQ4 885 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 TRAPPC6BQ86SZ2 158 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CPXM2Q8N436 756 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 AGBL5Q8NDL9 886 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 RCBTB1Q8NDN9 531 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ACTRT3Q9BYD9 372 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 LRRC42Q9Y546 428 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ABOP16442 354 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 LHCGRP22888 699 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CST5P28325 142 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CLCN2P51788 898 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 SAMD12Q8N8I0 201 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 OR52E1Q8NGJ3 308 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 DNMT3BQ9UBC3 853 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 MCTS1Q9ULC4 181 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 TRBV2A0A0J9YWF9 115 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 SLC26A5P58743 744 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ARF3P61204 181 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ARF1P84077 181 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 NPRL3Q12980 569 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 PDZD3Q86UT5 571 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CBARPQ8N350 705 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 PGAP3Q96FM1 320 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 DTD2Q96FN9 168 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF559Q9BR84 538 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF471Q9BX82 626 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 DNTTIP1Q9H147 329 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 PELI2Q9HAT8 420 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF175Q9Y473 711 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 NSG1A0A0A6YYJ2 146 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 FRKP42685 505 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 DPPA4Q7L190 304 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 CDRT4Q8N9R6 151 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 OR8J1Q8NGP2 316 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 NECAB3Q96P71 396 aaPredicted RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ATG5Q9H1Y0 275 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 ITGB1BP2Q9UKP3 347 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 DNAJC15Q9Y5T4 150 aa13.43□□□□□ -0.26
UBE3A-220ENST00000630424 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
UBE3A-220ENST00000630424 SLC22A31A6NKX4 558 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 LCATP04180 440 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 TPTEP56180 551 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 SLC7A9P82251 487 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 RBPJQ06330 500 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 MFSD13AQ14CX5 517 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 TMEM201Q5SNT2 666 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 NEIL3Q8TAT5 605 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 ARL5BQ96KC2 179 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 PDLIM7Q9NR12 457 aa13.42□□□□□ -0.26
UBE3A-220ENST00000630424 IL20RAQ9UHF4 553 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms