RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 MANFP55145 182 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TAS2R38P59533 333 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 NCF4Q15080 339 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 EXOSC6Q5RKV6 272 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CADM3Q8N126 398 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 LINC00471Q8N535 108 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 AMER2Q8N7J2 671 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PLA2G15Q8NCC3 412 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 C7orf57Q8NEG2 295 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 FAM46DQ8NEK8 389 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 KBTBD8Q8NFY9 601 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OR4D11Q8NGI4 311 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OR5AR1Q8NGP9 310 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 RAB8BQ92930 207 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 EXOSC8Q96B26 276 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SDHCQ99643 169 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 NUAK2Q9H093 628 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 INIPQ9NRY2 104 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 MAN2C1Q9NTJ4 1040 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 C5AR2Q9P296 337 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TESQ9UGI8 421 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 COQ9O75208 318 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 RPN2P04844 631 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 VAMP1P23763 118 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 DRD3P35462 400 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CDC42P60953 191 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CDK3Q00526 305 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 FUT5Q11128 374 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ST3GAL4Q11206 333 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ZNF234Q14588 700 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ENTPD8Q5MY95 495 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PGBD2Q6P3X8 592 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TBC1D19Q8N5T2 526 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 LINC01555Q8NAE3 123 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 MORN4Q8NDC4 146 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 WDR36Q8NI36 951 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SUSD6Q92537 303 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 QRFPRQ96P65 431 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 OPALINQ96PE5 141 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 C3orf14Q9HBI5 128 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ISYNA1Q9NPH2 558 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SACM1LQ9NTJ5 587 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PRELID1Q9Y255 219 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 NINQ8N4C6 2090 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 REV3LO60673 3130 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TRBV4-1A0A0J9YWV2 114 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 C10orf142B7Z368 130 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PDPK1O15530 556 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 KCNJ13O60928 360 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PCDH8O95206 1070 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PTTG1O95997 202 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CDK5Q00535 292 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 COX10Q12887 443 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 HEPACAMQ14CZ8 416 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TMEM35AQ53FP2 167 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 WDR45BQ5MNZ6 344 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ARMC4Q5T2S8 1044 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 COMTD1Q86VU5 262 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SMPDL3AQ92484 453 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 NR4A3Q92570 626 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TXNDC15Q96J42 360 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 KCNS3Q9BQ31 491 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 AIF1LQ9BQI0 150 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 JAM3Q9BX67 310 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 FOXQ1Q9C009 403 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PRDM9Q9NQV7 894 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 DDX28Q9NUL7 540 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 MS4A12Q9NXJ0 267 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ANKMY1Q9P2S6 941 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC13A4Q9UKG4 626 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CES1P1Q9UKY3 287 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TMEM98Q9Y2Y6 226 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 HEATR5BQ9P2D3 2071 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 AQP9O43315 295 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TMPRSS11DO60235 418 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 APOA1P02647 267 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 DCNP07585 359 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TNNI3P19429 210 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 GTF2E2P29084 291 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PKLRP30613 574 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 GJA4P35212 333 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CCR8P51685 355 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TPTEP56180 551 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CSNK1G2P78368 415 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ZP2Q05996 745 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CNTN1Q12860 1018 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 HTR4Q13639 388 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 PDGFRLQ15198 375 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 MLF2Q15773 248 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 TMEM95Q3KNT9 176 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SOWAHCQ53LP3 525 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 ARMCX4Q5H9R4 360 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 SPANXN2Q5MJ10 180 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 AGBL4Q5VU57 503 aa6.76□□□□□ -1.33
CTNNA1-244ENST00000627109 CEACAM20Q6UY09 585 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms