RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TRMT12Q53H54 448 aaKnown RBP20.55■□□□□ 0.88
SF1-220ENST00000626028 FGD2Q7Z6J4 655 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 TMEM251Q8N6I4 163 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 OR52R1Q8NGF1 315 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 OR6Y1Q8NGX8 325 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 ITLN2Q8WWU7 325 aaPredicted RBP20.55■□□□□ 0.88
SF1-220ENST00000626028 BTBD9Q96Q07 612 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 BBS4Q96RK4 519 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 NXF5Q9H1B4 397 aaKnown RBP20.55■□□□□ 0.88
SF1-220ENST00000626028 TUBA8Q9NY65 449 aaPredicted RBP20.55■□□□□ 0.88
SF1-220ENST00000626028 B4GALT7Q9UBV7 327 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 ACTL7BQ9Y614 415 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 A0A087WV62 115 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 FRG2CA6NGY1 282 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 TM9SF1O15321 606 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 CTIFO43310 598 aaKnown RBP20.54■□□□□ 0.88
SF1-220ENST00000626028 HCN1O60741 890 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 PPM1BO75688 479 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 PCSK2P16519 638 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 PIGAP37287 484 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 HSF1Q00613 529 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 SNTA1Q13424 505 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 SLC10A1Q14973 349 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 EXOSC7Q15024 291 aaKnown RBP20.54■□□□□ 0.88
SF1-220ENST00000626028 LTB4RQ15722 352 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 UGT3A2Q3SY77 523 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 Q6ZSR9 355 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 NUP54Q7Z3B4 507 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 SPPL2AQ8TCT8 520 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 DIO2Q92813 273 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 DOHHQ9BU89 302 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 MECRQ9BV79 373 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 ANGPTL4Q9BY76 406 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 TUBB1Q9H4B7 451 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 PROK2Q9HC23 129 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 ACKR4Q9NPB9 350 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 TAS2R9Q9NYW1 312 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 GPR55Q9Y2T6 319 aaPredicted RBP20.54■□□□□ 0.88
SF1-220ENST00000626028 POLR3HQ9Y535 204 aaPredicted RBP20.54■□□□□ 0.88
SF1-220ENST00000626028 CELSR2Q9HCU4 2923 aa20.54■□□□□ 0.88
SF1-220ENST00000626028 FAM166BA8MTA8 275 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 G3V3Y1 287 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 AQP7O14520 342 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 BCKDKO14874 412 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 BIRC5O15392 142 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 TBX19O60806 448 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 ABCB7O75027 752 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 CHRNGP07510 517 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 ABCB1P08183 1280 aaPredicted RBP20.53■□□□□ 0.88
SF1-220ENST00000626028 DDX5P17844 614 aaKnown RBP20.53■□□□□ 0.88
SF1-220ENST00000626028 NTSP30990 170 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 MAGEA5P43359 124 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 MRPS35P82673 323 aaKnown RBP20.53■□□□□ 0.88
SF1-220ENST00000626028 DUSP8Q13202 625 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 TNFAIP8L3Q5GJ75 292 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 TMEM198Q66K66 360 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 MRGPRGQ86SM5 289 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 TICAM1Q8IUC6 712 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 OR9A2Q8NGT5 310 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 PGM2Q96G03 612 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 ZNF597Q96LX8 424 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 ITPAQ9BY32 194 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 DEFB127Q9H1M4 99 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 TP63Q9H3D4 680 aaPredicted RBP20.53■□□□□ 0.88
SF1-220ENST00000626028 ZNF703Q9H7S9 590 aaPredicted RBP20.53■□□□□ 0.88
SF1-220ENST00000626028 SH3BGRL2Q9UJC5 107 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 DTX4Q9Y2E6 619 aa20.53■□□□□ 0.88
SF1-220ENST00000626028 PLOD2O00469 737 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 LSM1O15116 133 aaKnown RBP20.52■□□□□ 0.88
SF1-220ENST00000626028 COQ9O75208 318 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 TRIM3O75382 744 aaPredicted RBP20.52■□□□□ 0.88
SF1-220ENST00000626028 CREB1P16220 341 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 FBXW4P57775 412 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 PRAMEF20Q5VT98 475 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 TMEM211Q6ICI0 200 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 FAM180BQ6P0A1 224 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 TRILQ7L0X0 811 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 PACS2Q86VP3 889 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 KIRREL3Q8IZU9 778 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 TWIST2Q8WVJ9 160 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 NTNG2Q96CW9 530 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 PHF12Q96QT6 1004 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 DMRTA2Q96SC8 542 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 CACNA1DQ01668 2161 aa20.52■□□□□ 0.88
SF1-220ENST00000626028 TPOP07202 933 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 LINC00032P0C843 101 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 MYZAPP0CAP1 466 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 ELAVL4P26378 380 aaKnown RBP20.51■□□□□ 0.87
SF1-220ENST00000626028 CASP3P42574 277 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 ASMTP46597 345 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 SH2D4BQ5SQS7 431 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 LRIG3Q6UXM1 1119 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 EXOC3L1Q86VI1 746 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 OR5M3Q8NGP4 307 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 OR2T11Q8NH01 316 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 CDC26Q8NHZ8 85 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 SARAFQ96BY9 339 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 MTERF3Q96E29 417 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 OMA1Q96E52 524 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 TMEM41AQ96HV5 264 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms