RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 PATE1Q8WXA2 126 aa9.64□□□□□ -0.87
SRGAP2-217ENST00000624873 MRGPRX3Q96LB0 322 aa9.64□□□□□ -0.87
SRGAP2-217ENST00000624873 ACSS1Q9NUB1 689 aaPredicted RBP9.64□□□□□ -0.87
SRGAP2-217ENST00000624873 RAB26Q9ULW5 256 aa9.64□□□□□ -0.87
SRGAP2-217ENST00000624873 PCDHB14Q9Y5E9 798 aa9.64□□□□□ -0.87
SRGAP2-217ENST00000624873 E2F3O00716 465 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC30A4O14863 429 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ANKRD28O15084 1053 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 VNN2O95498 520 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ETV4P43268 484 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ERV3-1Q14264 604 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 LRIF1Q5T3J3 769 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ZCCHC7Q8N3Z6 543 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 LMNTD1Q8N9Z9 388 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 L3MBTL4Q8NA19 623 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 TMBIM1Q969X1 311 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 DDIT4LQ96D03 193 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SGTBQ96EQ0 304 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ADAD1Q96M93 576 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC30A3Q99726 388 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ZPBPQ9BS86 351 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 NANSQ9NR45 359 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CLEC1BQ9P126 229 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 HMGN2P05204 90 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CAPZBP47756 277 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 OR1E2P47887 323 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 GBX2P52951 348 aaPredicted RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 FOXA1P55317 472 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 TNFRSF17Q02223 184 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 MYBPC3Q14896 1274 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ARMC4Q5T2S8 1044 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ISLR2Q6UXK2 745 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 TMPPEQ6ZT21 453 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 NLGN4XQ8N0W4 816 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ZNF433Q8N7K0 673 aaPredicted RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 OR52R1Q8NGF1 315 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 EBF2Q9HAK2 575 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 DDX28Q9NUL7 540 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 KCMF1Q9P0J7 381 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 LOXL2Q9Y4K0 774 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 C11orf98E9PRG8 122 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ABCB7O75027 752 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 RFPL3O75679 317 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 NPPBP16860 134 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 S100GP29377 79 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC15A1P46059 708 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 MAT1AQ00266 395 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ZNF57Q68EA5 555 aaPredicted RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 TMEM71Q6P5X7 295 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 MAMDC2Q7Z304 686 aaPredicted RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 NPLQ9BXD5 320 aaPredicted RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 MS4A8Q9BY19 250 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CSNK1G3Q9Y6M4 447 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CCDC187A0A096LP49 1063 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 EI24O14681 340 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CASKO14936 926 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 DIRAS1O95057 198 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CBLP22681 906 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SRYQ05066 204 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 BNIP3Q12983 259 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 EIF3IQ13347 325 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 KHDC1Q4VXA5 237 aaKnown RBP9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SFT2D3Q587I9 215 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 TCEAL6Q6IPX3 200 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 KRT77Q7Z794 578 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 CCL4L1Q8NHW4 92 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SFXN5Q8TD22 340 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 ADOQ96SZ5 270 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 NT5DC2Q9H857 520 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
SRGAP2-217ENST00000624873 LILRA5A6NI73 299 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 FAAHO00519 579 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 HOXD12P35452 270 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 MNDAP41218 407 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 EPHA4P54764 986 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 VLDLRP98155 873 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 ALG10BQ5I7T1 473 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 AP1ARQ63HQ0 302 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 FAM180BQ6P0A1 224 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 SLC15A3Q8IY34 581 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 PRR22Q8IZ63 422 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 GPR137CQ8N3F9 429 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 PACRGLQ8N7B6 248 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 ZNF676Q8N7Q3 588 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 TP53INP1Q96A56 240 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 NMD3Q96D46 503 aaKnown RBP9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 LINC00615Q96LM1 132 aaPredicted RBP9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 ZNF578Q96N58 590 aaPredicted RBP9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 ORAI3Q9BRQ5 295 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 MCTS1Q9ULC4 181 aaKnown RBP9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 DOCK5Q9H7D0 1870 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 CTNSO60931 367 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 AIFM1O95831 613 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 CSF2P04141 144 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 ABOP16442 354 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 GDF1P27539 372 aa9.62□□□□□ -0.87
SRGAP2-217ENST00000624873 GDI2P50395 445 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms