RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NFYAP23511 347 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 AKT2P31751 481 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PPM1AP35813 382 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 LRRC26Q2I0M4 334 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 FLYWCH1Q4VC44 716 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CD276Q5ZPR3 534 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ENTHD1Q8IYW4 607 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ZNF454Q8N9F8 522 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TMEM41AQ96HV5 264 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 C20orf27Q9GZN8 174 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 DNTTIP1Q9H147 329 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 A0A1B0GVT2 93 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 MAFKO60675 156 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 FHP07954 510 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR12D1P0DN82 309 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 GABRR2P28476 465 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CHRFAM7AQ494W8 412 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CBLL1Q75N03 491 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 FAM129CQ86XR2 697 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
VCL-206ENST00000623461 FAM46BQ96A09 425 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR51B5Q9H339 312 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 INPP5EQ9NRR6 644 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PPP4R1LQ9P1A2 415 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 ITGB4P16144 1822 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 FAM155AB1AL88 458 aaPredicted RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 BEST1O76090 585 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 AMY2AP04746 511 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 S1PR1P21453 382 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 HOXC12P31275 282 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PRSS3P35030 304 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 SOX2P48431 317 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 SLC22A15Q8IZD6 547 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 TMEM145Q8NBT3 493 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR9A1PQ8NGU1 263 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 RAB8BQ92930 207 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ZDHHC4Q9NPG8 344 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 WASH4PA8MWX3 477 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 RFXAPO00287 272 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ADAM10O14672 748 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PTPN2P17706 415 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 VIPR1P32241 457 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR1D2P34982 312 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 LSSP48449 732 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ADPRMQ3LIE5 342 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 SLC9B2Q86UD5 537 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 SLC22A8Q8TCC7 542 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 LURAP1Q96LR2 239 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 C10orf90Q96M02 699 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CACNG3O60359 315 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 RDH16O75452 317 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ZDHHC11BP0C7U3 371 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CSKP41240 450 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 IRF5Q13568 498 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 UGT3A2Q3SY77 523 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 KDELC1Q6UW63 502 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 LBX2Q6XYB7 198 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 UMODL1-AS1Q8N2C9 162 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PXT1Q8NFP0 134 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR52B6Q8NGF0 335 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 MZB1Q8WU39 189 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ARPC5LQ9BPX5 153 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 COPS3Q9UNS2 423 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 MN1Q10571 1320 aaPredicted RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 BAZ2AQ9UIF9 1905 aaKnown RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 EIF3FO00303 357 aaPredicted RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 RPS17P08708 135 aaKnown RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 GABRA5P31644 462 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 BDKRB1P46663 353 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 BRAT1Q6PJG6 821 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CNTN4Q8IWV2 1026 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 SCARB1Q8WTV0 552 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 LCN9Q8WX39 176 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
VCL-206ENST00000623461 ORAI3Q9BRQ5 295 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 DPEP2Q9H4A9 486 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 CENPMQ9NSP4 180 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 NOX1Q9Y5S8 564 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 E9PI62 339 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 M0R129 80 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 NR2C1P13056 603 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 IGFBP4P22692 258 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ALDH3B1P43353 468 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 RABGGTBP53611 331 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 PXDC1Q5TGL8 231 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 GDPD4Q6W3E5 623 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ZNF709Q8N972 641 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 OR9Q2Q8NGE9 314 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 HOXD1Q9GZZ0 328 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 FAM86C1Q9NVL1 165 aa8.49□□□□□ -1.05
VCL-206ENST00000623461 ANKRD28O15084 1053 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ERI3O43414 337 aaKnown RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ZNF780AO75290 641 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 CYP17A1P05093 508 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ADGRF1Q5T601 910 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms