RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CTNNB1P35222 781 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SOX6P35712 828 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ACTR1BP42025 376 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 RNF144AP50876 292 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 SPCS3P61009 180 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 TEAD4Q15561 434 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 MPPE1Q53F39 396 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ADNP2Q6IQ32 1131 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 RGS7BPQ6MZT1 257 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 POMZP3Q6PJE2 187 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 Q6ZPB1 254 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 AHSA2Q719I0 299 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 MAL2Q969L2 176 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ECHDC3Q96DC8 303 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 TPT1P8Q9HAU6 139 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 EQTNQ9NQ60 294 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 DYRK4Q9NR20 520 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 SCN8AQ9UQD0 1980 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 NPIPB8E9PQR5 432 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 BRINP1O60477 761 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PLOD3O60568 738 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PQBP1O60828 265 aaKnown RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 WBP4O75554 376 aaKnown RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 INHAP05111 366 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 VAMP1P23763 118 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 KCNJ3P48549 501 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 ERVK-25P63136 954 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 CHAF1BQ13112 559 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 RAB33AQ14088 237 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 SERTAD2Q14140 314 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 GAREM2Q75VX8 874 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 KIAA0907Q7Z7F0 614 aaPredicted RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 CHST14Q8NCH0 376 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 FCRL1Q96LA6 429 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 C3orf14Q9HBI5 128 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 IMPAD1Q9NX62 359 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 SPHK1Q9NYA1 384 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PCDHB11Q9Y5F2 797 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 TMEM202A6NGA9 273 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 E7EQ34 232 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 ETHE1O95571 254 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 VIPP01282 170 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PGDP52209 483 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 CRYBA2P53672 197 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 CASP9P55211 416 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 NPRL3Q12980 569 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 DOC2AQ14183 400 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PUM1Q14671 1186 aaKnown RBP eCLIP11.79□□□□□ -0.52
LITAF-221ENST00000622633 MPEG1Q2M385 716 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 EIF2S3LQ2VIR3 472 aaKnown RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 PLEKHS1Q5SXH7 462 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 RAB11FIP2Q7L804 512 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 THOC6Q86W42 341 aaKnown RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 SYNPOQ8N3V7 929 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 OR8J2Q8NGG1 315 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 MYLIPQ8WY64 445 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 KCNC2Q96PR1 638 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 GFM1Q96RP9 751 aaKnown RBP11.79□□□□□ -0.52
LITAF-221ENST00000622633 DUSP26Q9BV47 211 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PIGUQ9H490 435 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 FZD4Q9ULV1 537 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 PPIL1Q9Y3C6 166 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 ZNF451Q9Y4E5 1061 aa11.79□□□□□ -0.52
LITAF-221ENST00000622633 OR2AG2A6NM03 316 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 FAM170BA6NMN3 283 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 GABRR3A8MPY1 467 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 SLC16A5O15375 505 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 APOC3P02656 99 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 C9P02748 559 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ADRB1P08588 477 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 FGF2P09038 288 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ACPPP15309 386 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ITGA1P56199 1179 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ACSM2AQ08AH3 577 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 NAE1Q13564 534 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 CCSMST1Q4G0I0 132 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ACSM2BQ68CK6 577 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 FAHD1Q6P587 224 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 TMPRSS11AQ6ZMR5 421 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 WDR20Q8TBZ3 569 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 DNASE1L2Q92874 299 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 MED8Q96G25 268 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 C7orf34Q96L11 122 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms