RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 POLR1CO15160 346 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SULT1C4O75897 302 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 CCR7P32248 378 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SNU13P55769 128 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 IL18Q14116 193 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 CTF1Q16619 201 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ADPRMQ3LIE5 342 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 NANOGNBQ7Z5D8 188 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ANKRD13BQ86YJ7 626 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 EID2Q8N6I1 236 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HUS1BQ8NHY5 278 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HPS1Q92902 700 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 FKBP10Q96AY3 582 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 MAGIXQ9H6Y5 334 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SERINC1Q9NRX5 453 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ANKMY1Q9P2S6 941 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 P2RX2Q9UBL9 471 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 CKLFQ9UBR5 152 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ACSL5Q9ULC5 683 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 LAMA3Q16787 3333 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM265A0A087WTH1 108 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SH3D21A4FU49 640 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 LOC110117498-PIK3R3F6TDL0 507 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 G3V3Y1 287 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 H3BML4 177 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 GAPDHSO14556 408 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 DUX1O43812 170 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 FZD6O60353 706 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 LCKP06239 509 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 C1GALT1C1LP0DN25 315 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CD36P16671 472 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 HMGA1P17096 107 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 RPS3P23396 243 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 MSX1P28360 303 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 IL12RB1P42701 662 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 OR1D4P47884 311 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 RAB15P59190 212 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CLCA4Q14CN2 919 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 BTBD16Q32M84 506 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SHQ1Q6PI26 577 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TSSK4Q6SA08 328 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TMPRSS11AQ6ZMR5 421 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 PARS2Q7L3T8 475 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 LAPTM4BQ86VI4 370 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 NPAS3Q8IXF0 933 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TTLQ8NG68 377 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 OR52E4Q8NGH9 312 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 MCHR1Q99705 422 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC22A1O15245 554 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CSTAP01040 98 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CYP17A1P05093 508 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 PROS1P07225 676 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 HNRNPA2B1P22626 353 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 DNAJA1P31689 397 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 IL18R1Q13478 541 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 HNRNPA1L2Q32P51 320 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 Q6ZPB1 254 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SAMD14Q8IZD0 417 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 JAGN1Q8N5M9 183 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 OR2AJ1Q8NGZ0 328 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ZDHHC1Q8WTX9 485 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CCNL2Q96S94 520 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TSSK6Q9BXA6 273 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 KLF16Q9BXK1 252 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC29A3Q9BZD2 475 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 STRADBQ9C0K7 418 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 OR51B6Q9H340 312 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 THUMPD1Q9NXG2 353 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 RARRES3Q9UL19 164 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 VDAC3Q9Y277 283 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 TET1Q8NFU7 2136 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 NPIPA5A0A0B4J1W7 369 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC9B1P1A6NJY1 282 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 NPIPA7E9PJI5 369 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 J3QLW9 94 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 AHSA1O95433 338 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 NPIPA8P0DM63 369 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF19P17023 458 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 C5AR1P21730 350 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 KDELR2P33947 212 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 RPS15P62841 145 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 HOXC5Q00444 222 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 KRR1Q13601 381 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SGCAQ16586 387 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 VMACQ2NL98 169 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 FIGLAQ6QHK4 219 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 PARM1Q6UWI2 310 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 ASPGQ86U10 573 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 KLHDC8AQ8IYD2 350 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 SPPL3Q8TCT6 385 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CWH43Q9H720 699 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 CALML5Q9NZT1 146 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 COL4A4P53420 1690 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM240BA0A1B0GVZ2 78 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM171A2A8MVW0 826 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 E7EQ34 232 aa7.85□□□□□ -1.15
PTPDC1-204ENST00000620992 LDB3O75112 727 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms