RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TMC8Q8IU68 726 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PSD4Q8NDX1 1056 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 NUP43Q8NFH3 380 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR6K6Q8NGW6 343 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 SNX33Q8WV41 574 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ACOT11Q8WXI4 607 aaPredicted RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 TP53INP1Q96A56 240 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 NEURL3Q96EH8 262 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRNT1Q96Q11 434 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 GFM1Q96RP9 751 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 SOHLH2Q9NX45 425 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ERVK13-1Q9NX77 482 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 TAS2R7Q9NYW3 318 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF221Q9UK13 617 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CLEC4AQ9UMR7 237 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 MED31Q9Y3C7 131 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 IGF2RP11717 2491 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 SOBPA7XYQ1 873 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 GRXCR1A8MXD5 290 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 HOXC11O43248 304 aaPredicted RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC19A1P41440 591 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ILKQ13418 452 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 C1orf61Q13536 156 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPR19Q15760 415 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 C22orf42Q6IC83 251 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PNCKQ6P2M8 343 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 RNF44Q7L0R7 432 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF367Q7RTV3 350 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 RBM45Q8IUH3 476 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 LAS2Q8IYD9 372 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC16A11Q8NCK7 471 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 NEIL3Q8TAT5 605 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 VMP1Q96GC9 406 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PLCXD1Q9NUJ7 323 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ERVK-11Q9UQG0 969 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ATG4BQ9Y4P1 393 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 REM1O75628 298 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 OXSR1O95747 527 aaPredicted RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 MC3RP41968 323 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 GJA8P48165 433 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 IL18Q14116 193 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 DSG2Q14126 1118 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CTF1Q16619 201 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRRT3Q5FWE3 981 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 KLHL17Q6TDP4 642 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2L5Q8NG80 312 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 MRPL48Q96GC5 212 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 DMRTB1Q96MA1 342 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PITX2Q99697 317 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 QRSL1Q9H0R6 528 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRSS16Q9NQE7 514 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 IKZF2Q9UKS7 526 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 DOCK6Q96HP0 2047 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CSPG4Q6UVK1 2322 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 MYL9P24844 172 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CSNK1G2P78368 415 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PON3Q15166 354 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF542PQ5EBM4 170 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAHD1Q6P587 224 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM107Q6UX40 140 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 CYB561A3Q8NBI2 242 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 PLA2G15Q8NCC3 412 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 TOR1AIP2Q8NFQ8 470 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 C16orf58Q96GQ5 468 aa5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 RC3H2Q9HBD1 1191 aaKnown RBP5.33□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A087WUU8 490 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 PROM1O43490 865 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRKAR1AP10644 381 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 JUNDP17535 347 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 NDUFV2P19404 249 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 PTPN6P29350 595 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 SOX9P48436 509 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 RAB7AP51149 207 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF155Q12901 538 aaPredicted RBP5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF77Q15935 545 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 LRRC26Q2I0M4 334 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2G6Q5TZ20 316 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 TANGO2Q6ICL3 276 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ABHD17CQ6PCB6 329 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 PODNL1Q6PEZ8 512 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM83HQ6ZRV2 1179 aaPredicted RBP5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ASPGQ86U10 573 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZBTB8BQ8NAP8 495 aaPredicted RBP5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2T33Q8NG76 320 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2A1Q8NGT9 310 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ABCG5Q9H222 651 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM183AA6NL82 134 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 C12orf71A8MTZ7 269 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 NPIPB8E9PQR5 432 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 ARHGAP33O14559 1287 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 YY2O15391 372 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 FCMRO60667 390 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 GASTP01350 101 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 TNFSF8P32971 234 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 BMP8BP34820 402 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 CENPAP49450 140 aa5.32□□□□□ -1.56
SYNCRIP-204ENST00000616122 HNRNPA0Q13151 305 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms