RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ONECUT3O60422 494 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 IVDP26440 423 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RPL7AP62424 266 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 DUOXA1Q1HG43 343 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MSS51Q4VC12 460 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 HECTD2Q5U5R9 776 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TSSK4Q6SA08 328 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PROKR2Q8NFJ6 384 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 AARSD1Q9BTE6 412 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PARD6AQ9NPB6 346 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C1GALT1Q9NS00 363 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MAN2C1Q9NTJ4 1040 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 K7EPK0 472 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KDELR3O43731 214 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF888P0CJ79 500 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ESRP1Q6NXG1 681 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CHRDL2Q6WN34 429 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 NDUFAF7Q7L592 441 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FAM71E2Q8N5Q1 922 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KXD1Q9BQD3 176 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CEP290O15078 2479 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TRAV19A0A0A6YYK7 116 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 AGPAT2O15120 278 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 P2RX6O15547 441 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 UBL3O95164 117 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 KAT7O95251 611 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF286BP0CG31 522 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CTPS1P17812 591 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OR3A2P47893 321 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RPS13P62277 151 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ABHD18Q0P651 414 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MFSD10Q14728 455 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 DBF4BQ8NFT6 615 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FBXL21Q9UKT6 434 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 WDR45Q9Y484 360 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ATRNL1Q5VV63 1379 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SCG5P05408 212 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PTPRAP18433 802 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RAB5AP20339 215 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 AQP1P29972 269 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RAG2P55895 527 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 RIN1Q13671 783 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SFRP4Q6FHJ7 346 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MAPK15Q8TD08 544 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CA5BP1Q8WTZ4 195 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 YIPF6Q96EC8 236 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 BTN2A3PQ96KV6 586 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 UHRF1Q96T88 793 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TCEAL2Q9H3H9 227 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 C14orf166Q9Y224 244 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 PCDHB14Q9Y5E9 798 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 COL16A1Q07092 1604 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 IL33O95760 270 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF250P15622 560 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF7P17097 686 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 L1CAMP32004 1257 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 ICAM3P32942 547 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 CLCNKAP51800 687 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 NUDT6P53370 316 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FABP9Q0Z7S8 132 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MEF2DQ14814 521 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 LASP1Q14847 261 aaKnown RBP4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SCGB2B2Q4G0G5 96 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 THEM4Q5T1C6 240 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM65Q6PI78 240 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 FRRS1Q6ZNA5 592 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 SPACA1Q9HBV2 294 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 POMT2Q9UKY4 750 aa4.73□□□□□ -1.65
VPS13D-213ENST00000613099 MAGEB17A8MXT2 336 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 APEHP13798 732 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SDHAP31040 664 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TCP10Q12799 353 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MTAPQ13126 283 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SEMA5AQ13591 1074 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TRMT10BQ6PF06 316 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 LYPD8Q6UX82 237 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CD300LGQ6UXG3 332 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TFAP2EQ6VUC0 442 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM163Q8TC26 289 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NTAN1Q96AB6 310 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MTERF1Q99551 399 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 DNAJC27Q9NZQ0 273 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FAAHO00519 579 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 HPGDSO60760 199 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RPL10P27635 214 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SUMO1P63165 101 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZC3H14Q6PJT7 736 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PYCR2Q96C36 320 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FAM46AQ96IP4 442 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SDR39U1Q9NRG7 319 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 LRFN1Q9P244 771 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GHRLQ9UBU3 117 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CHRNA9Q9UGM1 479 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MRPS23Q9Y3D9 190 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ARPC1BO15143 372 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FGF10O15520 208 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 DDTP30046 118 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TAS2R39P59534 338 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ADGRF1Q5T601 910 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms