RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 COMMD3Q9UBI1 195 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TBC1D29Q9UFV1 150 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC23A2Q9UGH3 650 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MKLN1Q9UL63 735 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MED12Q93074 2177 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SCO2O43819 266 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GABARAPO95166 117 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HIST1H2ABP04908 130 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 ENGP17813 658 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 FDXRP22570 491 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HTR3AP46098 478 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CDH12P55289 794 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 OR1D5P58170 312 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 NKX3-2P78367 333 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TSTQ16762 297 aaKnown RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 RFX4Q33E94 735 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GTDC1Q4AE62 458 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DDI2Q5TDH0 399 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 NOXRED1Q6NXP6 359 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HIST3H2AQ7L7L0 130 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DGLUCYQ7Z3D6 616 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CLEC14AQ86T13 490 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GPR65Q8IYL9 337 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CLECL1Q8IZS7 167 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC34A3Q8N130 599 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 AVL9Q8NBF6 648 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TMIEQ8NEW7 156 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC37A2Q8TED4 501 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HIST1H2ACQ93077 130 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 APIPQ96GX9 242 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MAP3K3Q99759 626 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 RAB11FIP5Q9BXF6 653 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GRXCR2A6NFK2 248 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 PATE3B3GLJ2 98 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 PEX12O00623 359 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 KIAA0513O60268 411 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 TOXO94900 526 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 STSP08842 583 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 COL9A1P20849 921 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 RPL35P42766 123 aaKnown RBP10.27□□□□□ -0.76
FAM3A-221ENST00000612856 PRR5P85299 388 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 PCDH1Q08174 1060 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 SPEM2Q0P670 501 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 FGFBP1Q14512 234 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 CTSL3PQ5NE16 218 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 ANXA8L1Q5VT79 327 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 KIAA0895LQ68EN5 471 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 CEACAM20Q6UY09 585 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 Q6ZPB1 254 aaPredicted RBP10.27□□□□□ -0.76
FAM3A-221ENST00000612856 RASSF6Q6ZTQ3 369 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 YIPF7Q8N8F6 280 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 OR7G3Q8NG95 312 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 MYDGFQ969H8 173 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 SLC35G5Q96KT7 338 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 TBL1XR1Q9BZK7 514 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.27□□□□□ -0.76
FAM3A-221ENST00000612856 SLA2Q9H6Q3 261 aa10.27□□□□□ -0.76
FAM3A-221ENST00000612856 HEXBP07686 556 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 F3P13726 295 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 PFKLP17858 780 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 CERS1P27544 350 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 GPR18Q14330 331 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 FLYWCH1Q4VC44 716 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 CLEC12AQ5QGZ9 265 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 TMEM64Q6YI46 380 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 ABHD13Q7L211 337 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 KRT74Q7RTS7 529 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 ASPGQ86U10 573 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 OR5K1Q8NHB7 308 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 ST8SIA2Q92186 375 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 RSC1A1Q92681 617 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 ARSGQ96EG1 525 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 TEX37Q96LM6 180 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 NLGN3Q9NZ94 848 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 RARRES3Q9UL19 164 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 CHD8Q9HCK8 2581 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 PRKRAO75569 313 aaKnown RBP10.27□□□□□ -0.77
FAM3A-221ENST00000612856 TPPPO94811 219 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 SLITRK5O94991 958 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 IGHA2P01877 340 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 C7P10643 843 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 BNC1Q01954 994 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 SELPLGQ14242 412 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 NFATC4Q14934 902 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 C5orf22Q49AR2 442 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 GARNL3Q5VVW2 1013 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 OR9A4Q8NGU2 314 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 OR6F1Q8NGZ6 308 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 PHOSPHO1Q8TCT1 267 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 FAM129BQ96TA1 746 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 TTYH1Q9H313 450 aaPredicted RBP10.27□□□□□ -0.77
FAM3A-221ENST00000612856 BEX1Q9HBH7 125 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 NKIRAS2Q9NYR9 191 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 ACTR10Q9NZ32 417 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 KLRF1Q9NZS2 232 aa10.27□□□□□ -0.77
FAM3A-221ENST00000612856 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
FAM3A-221ENST00000612856 BCKDHAP12694 445 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms