RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 RSPO4Q2I0M5 234 aaPredicted RBP20.85■□□□□ 0.93
UBE3C-209ENST00000611269 YOD1Q5VVQ6 348 aaPredicted RBP20.85■□□□□ 0.93
UBE3C-209ENST00000611269 BPHLQ86WA6 291 aaPredicted RBP20.85■□□□□ 0.93
UBE3C-209ENST00000611269 ZC3H7AQ8IWR0 971 aaKnown RBP20.85■□□□□ 0.93
UBE3C-209ENST00000611269 SHISA5Q8N114 240 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 UCN3Q969E3 161 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 PMEPA1Q969W9 287 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 SLC35C2Q9NQQ7 365 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 C5AR2Q9P296 337 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 TMEFF2Q9UIK5 374 aaPredicted RBP20.85■□□□□ 0.93
UBE3C-209ENST00000611269 ATG4BQ9Y4P1 393 aa20.85■□□□□ 0.93
UBE3C-209ENST00000611269 SEC16AO15027 2179 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 PMS2P1A4D2B8 440 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 B4E171 279 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 M0QX08 132 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 HS6ST1O60243 411 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 TSPAN7P41732 249 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 RAD23AP54725 363 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 LIM2P55344 173 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SKP1P63208 163 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 NADK2Q4G0N4 442 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 C6orf120Q7Z4R8 191 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 ZNF555Q8NEP9 628 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 LZICQ8WZA0 190 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 MMABQ96EY8 250 aaPredicted RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 TMEM121BQ9BXQ6 578 aaPredicted RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 AMBRA1Q9C0C7 1298 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SLC7A5P2Q9GIP4 190 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 A4GALTQ9NPC4 353 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 LYARQ9NX58 379 aaKnown RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SLC39A1Q9NY26 324 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 DAPP1Q9UN19 280 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SRPK3Q9UPE1 567 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 ANGPT4Q9Y264 503 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 TMEM184BQ9Y519 407 aaPredicted RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 FER1L5A0AVI2 2057 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 A0A087WXM4 84 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 A0A1W2PR48 441 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SEC24DO94855 1032 aaPredicted RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 BMP10O95393 424 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 ETV5P41161 510 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 AVPR1BP47901 424 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 ANKRD34AQ69YU3 496 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 NIPAL1Q6NVV3 410 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 SLC38A9Q8NBW4 561 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 TAMM41Q96BW9 452 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 DGCR14Q96DF8 476 aaKnown RBP20.84■□□□□ 0.93
UBE3C-209ENST00000611269 GRIP2Q9C0E4 1043 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 YIPF3Q9GZM5 350 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 REEP1Q9H902 201 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 KCMF1Q9P0J7 381 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 MAU2Q9Y6X3 613 aa20.84■□□□□ 0.93
UBE3C-209ENST00000611269 A0A1B0GX78 115 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 A0A1W2PNU3 283 aaPredicted RBP20.83■□□□□ 0.92
UBE3C-209ENST00000611269 DSCR3O14972 297 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 ATXN8OSP0DMR3 200 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 CDK9P50750 372 aaKnown RBP20.83■□□□□ 0.92
UBE3C-209ENST00000611269 HSPB3Q12988 150 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 C1orf189Q5VU69 101 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 RHBDD2Q6NTF9 364 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 REEP3Q6NUK4 255 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 CEACAM20Q6UY09 585 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 CA13Q8N1Q1 262 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 ADAMTS16Q8TE57 1224 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 MVB12AQ96EY5 273 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 AMDHD1Q96NU7 426 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 EPYCQ99645 322 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 NPLQ9BXD5 320 aaPredicted RBP20.83■□□□□ 0.92
UBE3C-209ENST00000611269 GLIPR2Q9H4G4 154 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 LYRM4Q9HD34 91 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 HCN3Q9P1Z3 774 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 PCDHGB3Q9Y5G1 929 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 ORC6Q9Y5N6 252 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 SCN2AQ99250 2005 aa20.83■□□□□ 0.92
UBE3C-209ENST00000611269 CCDC187A0A096LP49 1063 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 MYO1GB0I1T2 1018 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 H0YIG0 161 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 SLC16A6O15403 523 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 PROM1O43490 865 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 PRKRAO75569 313 aaKnown RBP20.82■□□□□ 0.92
UBE3C-209ENST00000611269 OR1D4P47884 311 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 ALDH3B2P48448 385 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 CCT3P49368 545 aaKnown RBP20.82■□□□□ 0.92
UBE3C-209ENST00000611269 MAPK10P53779 464 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 MAT1AQ00266 395 aaKnown RBP20.82■□□□□ 0.92
UBE3C-209ENST00000611269 TARDBPQ13148 414 aaKnown RBP eCLIP20.82■□□□□ 0.929e-7■■■■□ 24.4
UBE3C-209ENST00000611269 KCNAB2Q13303 367 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 IFI44LQ53G44 452 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 C18orf63Q68DL7 685 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 TSEN54Q7Z6J9 526 aaKnown RBP20.82■□□□□ 0.92
UBE3C-209ENST00000611269 THAP5Q7Z6K1 395 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 HORMAD2Q8N7B1 307 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 ZNF347Q96SE7 839 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 PISDQ9UG56 409 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 PHF11Q9UIL8 331 aa20.82■□□□□ 0.92
UBE3C-209ENST00000611269 SAMHD1Q9Y3Z3 626 aaKnown RBP20.82■□□□□ 0.92
UBE3C-209ENST00000611269 PLD2O14939 933 aa20.81■□□□□ 0.92
UBE3C-209ENST00000611269 CHST10O43529 356 aa20.81■□□□□ 0.92
UBE3C-209ENST00000611269 B4GALT2O60909 372 aa20.81■□□□□ 0.92
UBE3C-209ENST00000611269 DIRAS1O95057 198 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms