RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SLC6A6P31641 620 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MVKQ03426 396 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CCINQ13939 588 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 C18orf63Q68DL7 685 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ADNP2Q6IQ32 1131 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ZCCHC12Q6PEW1 402 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GPAT4Q86UL3 456 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 LHFPL3Q86UP9 236 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 NRMQ8IXM6 262 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PELI3Q8N2H9 469 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CDRT4Q8N9R6 151 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 IL17RCQ8NAC3 791 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 FANK1Q8TC84 345 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GNPDA2Q8TDQ7 276 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ADAD1Q96M93 576 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MS4A4EQ96PG1 132 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF300Q96RE9 604 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PALMDQ9NP74 551 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 AASSQ9UDR5 926 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ZFR2Q9UPR6 939 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM5Q9Y2B1 443 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PCDHGB7Q9Y5F8 929 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 A0A075B6Q4 140 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 FAM240BA0A1B0GVZ2 78 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 HYKKA2RU49 373 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CCDC182A6NF36 153 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 AREL1O15033 823 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TBX1O43435 398 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GKN3PP0CG01 181 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF182P17025 639 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CELP19835 753 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 DNASE1L1P49184 302 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 NR0B1P51843 470 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GBX2P52951 348 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 VBP1P61758 197 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TUBA4AP68366 448 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CSNK1G2P78368 415 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MAT1AQ00266 395 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TUBB3Q13509 450 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GPNMBQ14956 572 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ALG10BQ5I7T1 473 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 IDNKQ5T6J7 187 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CYHR1Q6ZMK1 362 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MARCH9Q86YJ5 346 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CHERPQ8IWX8 916 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 IQCF1Q8N6M8 205 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 OR2T33Q8NG76 320 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 SLC37A2Q8TED4 501 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 LRR1Q96L50 414 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 COQ10AQ96MF6 247 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ZFP3Q96NJ6 502 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM121BQ9BXQ6 578 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PTGES2Q9H7Z7 377 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TRBV5-4A0A0C4DH59 114 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C17orf105B2RV13 164 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TARM1B6A8C7 271 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 KHDRBS3O75525 346 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TSPAN12O95859 305 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 HPRP00739 348 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CD2P06729 351 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DBIP07108 87 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GNAO1P09471 354 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SDC2P34741 201 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CNR2P34972 360 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PCGF2P35227 344 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RORAP35398 523 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 AHRP35869 848 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NUDT1P36639 197 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CASRP41180 1078 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SLC19A1P41440 591 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 VLDLRP98155 873 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 B4GALNT1Q00973 533 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DPTQ07507 201 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.312e-9■■□□□ 11.8
CSDE1-218ENST00000610726 FAM69BQ5VUD6 431 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 HORMAD2Q8N7B1 307 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DENND6BQ8NEG7 585 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR8J1Q8NGP2 316 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CDS1Q92903 461 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 EID2BQ96D98 161 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GFM1Q96RP9 751 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 MAP3K3Q99759 626 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PELOQ9BRX2 385 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 MS4A8Q9BY19 250 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 POLDIP3Q9BY77 421 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 STRADBQ9C0K7 418 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PLEKHA1Q9HB21 404 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NEK6Q9HC98 313 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 AGPAT4Q9NRZ5 378 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C14orf105Q9NVL8 296 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CNIH4Q9P003 139 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RIMS3Q9UJD0 308 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GPR52Q9Y2T5 361 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C2CD4DB7Z1M9 353 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms