RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DNAH12Q6ZR08 3092 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 J3KTA2 159 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 RFXANKO14593 260 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 B4GALT3O60512 393 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TLR5O60602 858 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SNAI1O95863 264 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 MOCS2O96007 188 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SPI1P17947 270 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 DDX6P26196 483 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 LAP3P28838 519 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 S100A3P33764 101 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 ETV5P41161 510 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 PXNP49023 591 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 RGS4P49798 205 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 GPR143P51810 404 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SNX16P57768 344 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 RAB5BP61020 215 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 KCNJ10P78508 379 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 CLINT1Q14677 625 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 MBTPS1Q14703 1052 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 ZNF660Q6AZW8 331 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TAPT1Q6NXT6 567 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 DMBX1Q8NFW5 382 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SPATA5L1Q9BVQ7 753 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 NME7Q9Y5B8 376 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 NPTNQ9Y639 398 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 BRCA2P51587 3418 aa11.9□□□□□ -0.51
CTCFL-218ENST00000608440 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 KPNA3O00505 521 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 KCNK5O95279 499 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 COX5BP10606 129 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 GJA1P17302 382 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PTPN6P29350 595 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PSMD4P55036 377 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PRR5P85299 388 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ARHGAP1Q07960 439 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 IL10RBQ08334 325 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ECH1Q13011 328 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 TMEM44Q2T9K0 475 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PLK5Q496M5 336 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 NHLRC1Q6VVB1 395 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SVBPQ8N300 66 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SYNPOQ8N3V7 929 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ATPAF2Q8N5M1 289 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 MAL2Q969L2 176 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 TSSK6Q9BXA6 273 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 GSDMCQ9BYG8 508 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 CLMPQ9H6B4 373 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SEBOXQ9HB31 216 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 RPS6KB2Q9UBS0 482 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 WASH3PC4AMC7 463 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 FAM227AF5H4B4 570 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SUV39H1O43463 412 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PPP3CBP16298 524 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 CPEP16870 476 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 HOXC13P31276 330 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SLC6A4P31645 630 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 GCGRP47871 477 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 MLLT1Q03111 559 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 RIPPLY1Q0D2K3 151 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ADIGQ0VDE8 80 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SKP2Q13309 424 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 GANABQ14697 944 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SLC5A12Q1EHB4 618 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 TSEN54Q7Z6J9 526 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 NUDT13Q86X67 352 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 LAS2Q8IYD9 372 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 HDDC3Q8N4P3 179 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 TRAPPC12Q8WVT3 735 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PAWRQ96IZ0 340 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 ABHD1Q96SE0 405 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 KATNBL1Q9H079 304 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SLC25A19Q9HC21 320 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 MRPL15Q9P015 296 aaKnown RBP11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 KLHL42Q9P2K6 505 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 PLXNA1Q9UIW2 1896 aa11.89□□□□□ -0.51
CTCFL-218ENST00000608440 SLC31A2O15432 143 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms