RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 TMEM64Q6YI46 380 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 FGD2Q7Z6J4 655 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 MMP21Q8N119 569 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 OR2W6PQ8NHA6 318 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 CAVIN3Q969G5 261 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 SDCCAG3Q96C92 435 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 CTHRC1Q96CG8 243 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 TMCO6Q96DC7 493 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNF681Q96N22 645 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 DMRTA2Q96SC8 542 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 NXF5Q9H1B4 397 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNF703Q9H7S9 590 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 ACKR4Q9NPB9 350 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 HEY2Q9UBP5 337 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNF639Q9UID6 485 aa13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 CNOT11Q9UKZ1 510 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-210ENST00000607049 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 WDR1O75083 606 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 TRAPPC6AO75865 159 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 GABRA1P14867 456 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 S1PR1P21453 382 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ACVR2AP27037 513 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 PTGER4P35408 488 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 MGAT2Q10469 447 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 SNTA1Q13424 505 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 TOMM20Q15388 145 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 LTB4RQ15722 352 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 NNATQ16517 81 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 TRMT12Q53H54 448 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNF628Q5EBL2 1059 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 PRR22Q8IZ63 422 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 BANPQ8N9N5 519 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 OR5M9Q8NGP3 310 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 OR9A2Q8NGT5 310 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 RILPQ96NA2 401 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 FAM111AQ96PZ2 611 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ANGPTL4Q9BY76 406 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 MYNNQ9NPC7 610 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 ALKBH4Q9NXW9 302 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 KLRF1Q9NZS2 232 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
PKNOX1-210ENST00000607049 NPHS1O60500 1241 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PLOD3O60568 738 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 REM1O75628 298 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 CBX7O95931 251 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 ABCB1P08183 1280 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 IL12BP29460 328 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 CHRNB4P30926 498 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 SERPINB5P36952 375 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 NCBP2P52298 156 aaKnown RBP eCLIP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PMPCAQ10713 525 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 EFR3AQ14156 821 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PCLAFQ15004 111 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 ZNHIT3Q15649 155 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 CLEC6AQ6EIG7 209 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 FAM180BQ6P0A1 224 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 TICAM1Q8IUC6 712 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 DDIASQ8IXT1 998 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 OR1J4Q8NGS1 313 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PPP1R14CQ8TAE6 165 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 KAT2AQ92830 837 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 OMA1Q96E52 524 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 C11orf24Q96F05 449 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 LRTM1Q9HBL6 345 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PNPLA3Q9NST1 481 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 TAS2R7Q9NYW3 318 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 MRTO4Q9UKD2 239 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 OR10H1Q9Y4A9 318 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 POLR3HQ9Y535 204 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 PCDHGB3Q9Y5G1 929 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 CROCCQ5TZA2 2017 aa13.22□□□□□ -0.29
PKNOX1-210ENST00000607049 C15orf38-AP3S2A0A0A6YYH1 394 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 ADAM10O14672 748 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 TO15178 435 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 SPAG7O75391 227 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 ERN1O75460 977 aaKnown RBP13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 LRATO95237 230 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 CELA3AP09093 270 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 PRPH2P23942 346 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 MAPK1P28482 360 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms