RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ZNF700Q9H0M5 742 aa21.32■■□□□ 1
IRF3-227ENST00000600911 OR51I1Q9H343 314 aa21.32■■□□□ 1
IRF3-227ENST00000600911 C3orf14Q9HBI5 128 aa21.32■■□□□ 1
IRF3-227ENST00000600911 ADA2Q9NZK5 511 aa21.32■■□□□ 1
IRF3-227ENST00000600911 LAMA5O15230 3695 aa21.31■■□□□ 1
IRF3-227ENST00000600911 CFAP47Q6ZTR5 3102 aa21.31■■□□□ 1
IRF3-227ENST00000600911 SLC26A5P58743 744 aa21.31■■□□□ 1
IRF3-227ENST00000600911 BNC2Q6ZN30 1099 aaPredicted RBP21.31■■□□□ 1
IRF3-227ENST00000600911 CALHM3Q86XJ0 350 aa21.31■■□□□ 1
IRF3-227ENST00000600911 SLC16A11Q8NCK7 471 aa21.31■■□□□ 1
IRF3-227ENST00000600911 OR56A1Q8NGH5 318 aa21.31■■□□□ 1
IRF3-227ENST00000600911 OR1N1Q8NGS0 311 aa21.31■■□□□ 1
IRF3-227ENST00000600911 IMMP1LQ96LU5 166 aa21.31■■□□□ 1
IRF3-227ENST00000600911 MS4A4EQ96PG1 132 aa21.31■■□□□ 1
IRF3-227ENST00000600911 FOLH1BQ9HBA9 442 aa21.31■■□□□ 1
IRF3-227ENST00000600911 SPAG4Q9NPE6 437 aa21.31■■□□□ 1
IRF3-227ENST00000600911 CD300AQ9UGN4 299 aa21.31■■□□□ 1
IRF3-227ENST00000600911 CEP295Q9C0D2 2601 aa21.31■■□□□ 1
IRF3-227ENST00000600911 DOCK10Q96BY6 2186 aa21.3■■□□□ 1
IRF3-227ENST00000600911 MED13Q9UHV7 2174 aa21.3■■□□□ 1
IRF3-227ENST00000600911 A0A1W2PQ72 361 aa21.3■■□□□ 1
IRF3-227ENST00000600911 HNRNPCL1O60812 293 aaKnown RBP21.3■■□□□ 1
IRF3-227ENST00000600911 CD63P08962 238 aa21.3■■□□□ 1
IRF3-227ENST00000600911 IFI6P09912 130 aa21.3■■□□□ 1
IRF3-227ENST00000600911 MAP3K8P41279 467 aa21.3■■□□□ 1
IRF3-227ENST00000600911 PRR5P85299 388 aa21.3■■□□□ 1
IRF3-227ENST00000600911 MAPK11Q15759 364 aa21.3■■□□□ 1
IRF3-227ENST00000600911 ADRM1Q16186 407 aa21.3■■□□□ 1
IRF3-227ENST00000600911 PIGGQ5H8A4 983 aa21.3■■□□□ 1
IRF3-227ENST00000600911 NPSR1Q6W5P4 371 aa21.3■■□□□ 1
IRF3-227ENST00000600911 ZNF771Q7L3S4 317 aaPredicted RBP21.3■■□□□ 1
IRF3-227ENST00000600911 MRGPREQ86SM8 312 aa21.3■■□□□ 1
IRF3-227ENST00000600911 PTOV1Q86YD1 416 aa21.3■■□□□ 1
IRF3-227ENST00000600911 DAZLQ92904 295 aaKnown RBP21.3■■□□□ 1
IRF3-227ENST00000600911 MAL2Q969L2 176 aa21.3■■□□□ 1
IRF3-227ENST00000600911 LPAR4Q99677 370 aa21.3■■□□□ 1
IRF3-227ENST00000600911 ITPAQ9BY32 194 aa21.3■■□□□ 1
IRF3-227ENST00000600911 LIN28AQ9H9Z2 209 aaKnown RBP21.3■■□□□ 1
IRF3-227ENST00000600911 C19orf25Q9UFG5 118 aaPredicted RBP21.3■■□□□ 1
IRF3-227ENST00000600911 KCND3Q9UK17 655 aa21.3■■□□□ 1
IRF3-227ENST00000600911 PPIEQ9UNP9 301 aaKnown RBP21.3■■□□□ 1
IRF3-227ENST00000600911 HEMK1Q9Y5R4 338 aaPredicted RBP21.3■■□□□ 1
IRF3-227ENST00000600911 CACNA1AO00555 2505 aa21.3■■□□□ 1
IRF3-227ENST00000600911 HMGN4O00479 90 aa21.29■■□□□ 1
IRF3-227ENST00000600911 EFSO43281 561 aa21.29■■□□□ 1
IRF3-227ENST00000600911 TNFRSF21O75509 655 aa21.29■■□□□ 1
IRF3-227ENST00000600911 DNAJC8O75937 253 aaPredicted RBP21.29■■□□□ 1
IRF3-227ENST00000600911 SLITRK5O94991 958 aa21.29■■□□□ 1
IRF3-227ENST00000600911 TCN1P20061 433 aaPredicted RBP21.29■■□□□ 1
IRF3-227ENST00000600911 MATN1P21941 496 aa21.29■■□□□ 1
IRF3-227ENST00000600911 CRATP43155 626 aa21.29■■□□□ 1
IRF3-227ENST00000600911 GSK3BP49841 420 aa21.29■■□□□ 1
IRF3-227ENST00000600911 CORO7P57737 925 aa21.29■■□□□ 1
IRF3-227ENST00000600911 LIPEQ05469 1076 aa21.29■■□□□ 1
IRF3-227ENST00000600911 Q0VFX4 171 aa21.29■■□□□ 1
IRF3-227ENST00000600911 FUT5Q11128 374 aa21.29■■□□□ 1
IRF3-227ENST00000600911 ATP1A4Q13733 1029 aa21.29■■□□□ 1
IRF3-227ENST00000600911 PGM2L1Q6PCE3 622 aa21.29■■□□□ 1
IRF3-227ENST00000600911 IFNEQ86WN2 208 aa21.29■■□□□ 1
IRF3-227ENST00000600911 HPS6Q86YV9 775 aa21.29■■□□□ 1
IRF3-227ENST00000600911 MORN4Q8NDC4 146 aa21.29■■□□□ 1
IRF3-227ENST00000600911 B3GNT7Q8NFL0 401 aa21.29■■□□□ 1
IRF3-227ENST00000600911 GATA6Q92908 595 aa21.29■■□□□ 1
IRF3-227ENST00000600911 VSTM2LQ96N03 204 aa21.29■■□□□ 1
IRF3-227ENST00000600911 OR7D2Q96RA2 312 aa21.29■■□□□ 1
IRF3-227ENST00000600911 SEMA4CQ9C0C4 833 aa21.29■■□□□ 1
IRF3-227ENST00000600911 ZNF160Q9HCG1 818 aa21.29■■□□□ 1
IRF3-227ENST00000600911 LOC400499M0QZD8 3231 aa21.29■■□□□ 1
IRF3-227ENST00000600911 IGHEP01854 428 aa21.29■■□□□ 1
IRF3-227ENST00000600911 CAPNS1P04632 268 aa21.29■■□□□ 1
IRF3-227ENST00000600911 OR12D1P0DN82 309 aa21.29■■□□□ 1
IRF3-227ENST00000600911 PSG6Q00889 435 aa21.29■■□□□ 1
IRF3-227ENST00000600911 NNATQ16517 81 aa21.29■■□□□ 1
IRF3-227ENST00000600911 DUSP5Q16690 384 aa21.29■■□□□ 1
IRF3-227ENST00000600911 DNAL1Q4LDG9 190 aa21.29■■□□□ 1
IRF3-227ENST00000600911 C6orf163Q5TEZ5 329 aa21.29■■□□□ 1
IRF3-227ENST00000600911 C16orf47Q6ZP98 133 aaPredicted RBP21.29■■□□□ 1
IRF3-227ENST00000600911 HOXB13Q92826 284 aaPredicted RBP21.29■■□□□ 1
IRF3-227ENST00000600911 FGF11Q92914 225 aa21.29■■□□□ 1
IRF3-227ENST00000600911 MOAP1Q96BY2 351 aa21.29■■□□□ 1
IRF3-227ENST00000600911 SLC35A4Q96G79 324 aa21.29■■□□□ 1
IRF3-227ENST00000600911 LMF1Q96S06 567 aa21.29■■□□□ 1
IRF3-227ENST00000600911 P4HTMQ9NXG6 502 aa21.29■■□□□ 1
IRF3-227ENST00000600911 FBXL4Q9UKA2 621 aa21.29■■□□□ 1
IRF3-227ENST00000600911 APC2O95996 2303 aa21.29■■□□□ 1
IRF3-227ENST00000600911 MED19A0JLT2 244 aaPredicted RBP21.28■■□□□ 1
IRF3-227ENST00000600911 NKX2-8O15522 239 aa21.28■■□□□ 1
IRF3-227ENST00000600911 KRT75O95678 551 aa21.28■■□□□ 1
IRF3-227ENST00000600911 PGM1P36871 562 aa21.28■■□□□ 1
IRF3-227ENST00000600911 RASSF2P50749 326 aa21.28■■□□□ 1
IRF3-227ENST00000600911 ZNF155Q12901 538 aaPredicted RBP21.28■■□□□ 1
IRF3-227ENST00000600911 RNF111Q6ZNA4 994 aa21.28■■□□□ 1
IRF3-227ENST00000600911 ZZZ3Q8IYH5 903 aa21.28■■□□□ 1
IRF3-227ENST00000600911 OR4N2Q8NGD1 307 aa21.28■■□□□ 1
IRF3-227ENST00000600911 NDE1Q9NXR1 346 aa21.28■■□□□ 1
IRF3-227ENST00000600911 L3MBTL1Q9Y468 752 aa21.28■■□□□ 1
IRF3-227ENST00000600911 NCOR2Q9Y618 2525 aa21.28■■□□□ 1
IRF3-227ENST00000600911 C15orf38-AP3S2A0A0A6YYH1 394 aa21.27■■□□□ 1
IRF3-227ENST00000600911 GXYLT2A0PJZ3 443 aa21.27■■□□□ 1
IRF3-227ENST00000600911 TMEM200CA6NKL6 621 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms