RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TBK1Q9UHD2 729 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 PLLPQ9Y342 182 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 NINQ8N4C6 2090 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 C15orf38-AP3S2A0A0A6YYH1 394 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 C2orf72A6NCS6 295 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 GOLGA6L10A6NI86 522 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 GABRA1P14867 456 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 H2AFXP16104 143 aaPredicted RBP20.94■□□□□ 0.94
CCDC61-207ENST00000599044 PCSK2P16519 638 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 TAC1P20366 129 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 NRG3P56975 720 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 MRPS35P82673 323 aaKnown RBP20.94■□□□□ 0.94
CCDC61-207ENST00000599044 CRYZQ08257 329 aaKnown RBP20.94■□□□□ 0.94
CCDC61-207ENST00000599044 SNTB1Q13884 538 aaKnown RBP20.94■□□□□ 0.94
CCDC61-207ENST00000599044 RASA2Q15283 850 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 C6orf163Q5TEZ5 329 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 GPRIN3Q6ZVF9 776 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 TDRPQ86YL5 185 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 OR52R1Q8NGF1 315 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 MZB1Q8WU39 189 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 HGDQ93099 445 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 APIPQ96GX9 242 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 KCNA7Q96RP8 456 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 NODALQ96S42 347 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 SECISBP2Q96T21 854 aaKnown RBP20.94■□□□□ 0.94
CCDC61-207ENST00000599044 ACPTQ9BZG2 426 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 EHD3Q9NZN3 535 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 C15orf41Q9Y2V0 281 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 SLC6A5Q9Y345 797 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 TIMM22Q9Y584 194 aa20.94■□□□□ 0.94
CCDC61-207ENST00000599044 GNB5O14775 395 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 PPM1BO75688 479 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 SNX4O95219 450 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 HPNP05981 417 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 IL3P08700 152 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 PYGBP11216 843 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 CAPN3P20807 821 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 ATP5F1P24539 256 aaPredicted RBP20.93■□□□□ 0.94
CCDC61-207ENST00000599044 PTGDSP41222 190 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 EMDP50402 254 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 CDK9P50750 372 aaKnown RBP20.93■□□□□ 0.94
CCDC61-207ENST00000599044 PRKAA2P54646 552 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 HMGCS1Q01581 520 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 EIPR1Q53HC9 387 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 RIPPLY2Q5TAB7 128 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 SCIMPQ6UWF3 145 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 PACS2Q86VP3 889 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 NAXEQ8NCW5 288 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 METTL6Q8TCB7 284 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 NMRK1Q9NWW6 199 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 UTS2RQ9UKP6 389 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 EMCNQ9ULC0 261 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 DLGAP4Q9Y2H0 992 aa20.93■□□□□ 0.94
CCDC61-207ENST00000599044 A0A1W2PPM1 405 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 TLDC2A0PJX2 215 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 KRT6AP02538 564 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 KRT6BP04259 564 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 KRT6CP48668 564 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 MASP1P48740 699 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 TMED10P49755 219 aaKnown RBP20.92■□□□□ 0.94
CCDC61-207ENST00000599044 TRA2BP62995 288 aaKnown RBP20.92■□□□□ 0.94
CCDC61-207ENST00000599044 IFFO1Q0D2I5 559 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 CSTF3Q12996 717 aaKnown RBP20.92■□□□□ 0.94
CCDC61-207ENST00000599044 DCST1Q5T197 706 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 CDH24Q86UP0 819 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 CCDC116Q8IYX3 515 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 TNIP2Q8NFZ5 429 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 ZBTB9Q96C00 473 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 OMA1Q96E52 524 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 LCORQ96JN0 433 aaPredicted RBP20.92■□□□□ 0.94
CCDC61-207ENST00000599044 ZIM3Q96PE6 472 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 FAIM2Q9BWQ8 316 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 PPCSQ9HAB8 311 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 GALNT9Q9HCQ5 603 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 MCM8Q9UJA3 840 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 PSME2Q9UL46 239 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 PCDHGB3Q9Y5G1 929 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 ZNF780BQ9Y6R6 833 aa20.92■□□□□ 0.94
CCDC61-207ENST00000599044 UBFD1O14562 309 aaKnown RBP20.91■□□□□ 0.94
CCDC61-207ENST00000599044 UGT2B11O75310 529 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ULK1O75385 1050 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ESRRBO95718 433 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 HSD3B1P14060 373 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 HSD3B2P26439 372 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 PTPN6P29350 595 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 FOXA1P55317 472 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 RIPPLY3P57055 190 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ZNF844Q08AG5 666 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 TESK1Q15569 626 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 PRSS53Q2L4Q9 553 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ACSF3Q4G176 576 aaPredicted RBP20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ZNF628Q5EBL2 1059 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 WIPI1Q5MNZ9 446 aaPredicted RBP20.91■□□□□ 0.94
CCDC61-207ENST00000599044 ARHGAP21Q5T5U3 1957 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 TIGD3Q6B0B8 471 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 VASNQ6EMK4 673 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 WDR53Q7Z5U6 358 aaPredicted RBP20.91■□□□□ 0.94
CCDC61-207ENST00000599044 L3HYPDHQ96EM0 354 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 TMEM41AQ96HV5 264 aa20.91■□□□□ 0.94
CCDC61-207ENST00000599044 TMEM109Q9BVC6 243 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms