RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 DEFB124Q8NES8 71 aa21.77■■□□□ 1.08
SYMPK-212ENST00000598896 EFHD1Q9BUP0 239 aa21.77■■□□□ 1.08
SYMPK-212ENST00000598896 STRADBQ9C0K7 418 aa21.77■■□□□ 1.08
SYMPK-212ENST00000598896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 TCRBV16S1A1N1A0A5B0 115 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 ASNA1O43681 348 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 CSO75390 466 aaKnown RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 PGM3O95394 542 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 ZGLP1P0C6A0 271 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 ACP2P11117 423 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 ANXA11P50995 505 aaKnown RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 FAM98BQ52LJ0 330 aaKnown RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 EXOSC6Q5RKV6 272 aaKnown RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 VTCN1Q7Z7D3 282 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 SLCO6A1Q86UG4 719 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 SLC9A6Q92581 669 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 SLC47A1Q96FL8 570 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 SLC35A4Q96G79 324 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 PYURFQ96I23 114 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 CHID1Q9BWS9 393 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 UGT2B28Q9BY64 529 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 AKAP7Q9P0M2 348 aaPredicted RBP21.76■■□□□ 1.07
SYMPK-212ENST00000598896 B3GALT1Q9Y5Z6 326 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 ZNF292O60281 2723 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 CCDC88CQ9P219 2028 aa21.76■■□□□ 1.07
SYMPK-212ENST00000598896 M0QX08 132 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 SLC28A2O43868 658 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CNOT3O75175 753 aaKnown RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 RAP2AP10114 183 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CLCN2P51788 898 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 PGDP52209 483 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 ZNF267Q14586 743 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 DUSP5Q16690 384 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CYBRD1Q53TN4 286 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CRB2Q5IJ48 1285 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 EIF3MQ7L2H7 374 aaKnown RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 RAB11FIP2Q7L804 512 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 SLC30A8Q8IWU4 369 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 PTPMT1Q8WUK0 201 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 PHOX2BQ99453 314 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 TREX2Q9BQ50 279 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 ULBP3Q9BZM4 244 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 ERVK-19Q9WJR5 959 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 C5orf58C9J3I9 102 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 FOXD2O60548 495 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 MT-CO3P00414 261 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CHRM4P08173 479 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 NR2F1P10589 423 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 GALNSP34059 522 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 NSDHLQ15738 373 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 OVCH1Q7RTY7 1134 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 ERMP1Q7Z2K6 904 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 ADAMTS15Q8TE58 950 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CDS1Q92903 461 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 PELOQ9BRX2 385 aaKnown RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 CNPPD1Q9BV87 410 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 RSPO3Q9BXY4 272 aaPredicted RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 SEMA6AQ9H2E6 1030 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 PNO1Q9NRX1 252 aaKnown RBP21.75■■□□□ 1.07
SYMPK-212ENST00000598896 RPS6KA6Q9UK32 745 aa21.75■■□□□ 1.07
SYMPK-212ENST00000598896 A0A1W2PNU3 283 aaPredicted RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 FAM149AA5PLN7 773 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 C17orf105B2RV13 164 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 HNRNPRO43390 633 aaKnown RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 PEX2P28328 305 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 GCKP35557 465 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 MAP3K8P41279 467 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 EMDP50402 254 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 MAPK10P53779 464 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 TXNL4AP83876 142 aaKnown RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 OCA2Q04671 838 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 CHRNB3Q05901 458 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 BIKQ13323 160 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 HES3Q5TGS1 186 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 LPCAT4Q643R3 524 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 AMIGO2Q86SJ2 522 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 LIN37Q96GY3 246 aaPredicted RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 HSH2DQ96JZ2 352 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 SOX17Q9H6I2 414 aaPredicted RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 AGPAT4Q9NRZ5 378 aa21.74■■□□□ 1.07
SYMPK-212ENST00000598896 IFT80Q9P2H3 777 aaPredicted RBP21.74■■□□□ 1.07
SYMPK-212ENST00000598896 TEX51A0A1B0GUA7 166 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 VSTM2BA6NLU5 285 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 A8MUA0 341 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 CASQ2O14958 399 aaPredicted RBP21.73■■□□□ 1.07
SYMPK-212ENST00000598896 CLPSP04118 112 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 FUT7Q11130 342 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 LANCL3Q6ZV70 420 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 CDRT4Q8N9R6 151 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 TPD52L3Q96J77 140 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 MAGIXQ9H6Y5 334 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 C14orf105Q9NVL8 296 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 DTX4Q9Y2E6 619 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 ZFHX2Q9C0A1 2572 aaPredicted RBP21.73■■□□□ 1.07
SYMPK-212ENST00000598896 TMEM247A6NEH6 219 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 DUXAA6NLW8 204 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 SEMG1P04279 462 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 TNNI3P19429 210 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 TRIP10Q15642 601 aa21.73■■□□□ 1.07
SYMPK-212ENST00000598896 LRRC36Q1X8D7 754 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms