RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FRKP42685 505 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 CDK9P50750 372 aaKnown RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 DIO3P55073 304 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 CORO7P57737 925 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 HSF1Q00613 529 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ALDH6A1Q02252 535 aaKnown RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 EMX2Q04743 252 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 NTRK2Q16620 822 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ATP6AP1LQ52LC2 224 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 CT45A2Q5DJT8 189 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 TMEM107Q6UX40 140 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 MAVSQ7Z434 540 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 WDR53Q7Z5U6 358 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 RIMKLAQ8IXN7 391 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 SAMD14Q8IZD0 417 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 FNDC5Q8NAU1 212 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 GOLM1Q8NBJ4 401 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 C17orf47Q8NEP4 570 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 OR5M3Q8NGP4 307 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 PAQR8Q8TEZ7 354 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ZNF75CPQ92670 426 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 PPCDCQ96CD2 204 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 NTNG2Q96CW9 530 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ELP4Q96EB1 424 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 ZNF764Q96H86 408 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 SGCZQ96LD1 299 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 GPR137Q96N19 417 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 MANSC1Q9H8J5 431 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 VIPAS39Q9H9C1 493 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 GIMAP4Q9NUV9 329 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 TUBA8Q9NY65 449 aaPredicted RBP10.26□□□□□ -0.77
VRK3-210ENST00000596121 NKIRAS1Q9NYS0 192 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 SH3BP4Q9P0V3 963 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 NPFFR2Q9Y5X5 522 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
VRK3-210ENST00000596121 USP9YO00507 2555 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 PTPN13Q12923 2485 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 KLRC4-KLRK1H3BQV0 150 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 PLOD2O00469 737 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 ZNF195O14628 629 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 SCAMP2O15127 329 aaKnown RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 TO15178 435 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 HS6ST1O60243 411 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 ABCB1P08183 1280 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 RFPL3SP0C7P2 107 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 DRD5P21918 477 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 PPICP45877 212 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 UBAP2LQ14157 1087 aaKnown RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 CMPK2Q5EBM0 449 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 C6orf163Q5TEZ5 329 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 PRAMEF20Q5VT98 475 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 HLA-DQA1Q5Y7H0 255 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 GFRALQ6UXV0 394 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 LARP4Q71RC2 724 aaKnown RBP eCLIP10.25□□□□□ -0.77
VRK3-210ENST00000596121 WDR75Q8IWA0 830 aaKnown RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 TAGAPQ8N103 731 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 OR2L13Q8N349 312 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 FAM13CQ8NE31 585 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 OR4N2Q8NGD1 307 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 OR52N2Q8NGI0 321 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 HGDQ93099 445 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 COQ8BQ96D53 544 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 ERP27Q96DN0 273 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 MAGED4Q96JG8 741 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 LCORQ96JN0 433 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 BTBD9Q96Q07 612 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 WDR55Q9H6Y2 383 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 MEAF6Q9HAF1 191 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 SACM1LQ9NTJ5 587 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 ASIC5Q9NY37 505 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 SEC14L3Q9UDX4 400 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 MARCOQ9UEW3 520 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 ERRFI1Q9UJM3 462 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 C19orf53Q9UNZ5 99 aaPredicted RBP10.25□□□□□ -0.77
VRK3-210ENST00000596121 HRH3Q9Y5N1 445 aa10.25□□□□□ -0.77
VRK3-210ENST00000596121 NINQ8N4C6 2090 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 SPTAN1Q13813 2472 aaKnown RBP10.24□□□□□ -0.77
VRK3-210ENST00000596121 ZNF407Q9C0G0 2248 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 A0A087WV62 115 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FRG2CA6NGY1 282 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 LRRC3CA6NJW4 275 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FAM166BA8MTA8 275 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 ANKRD28O15084 1053 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 PDPK1O15530 556 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 ASNA1O43681 348 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 UGT2B11O75310 529 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 PPM1BO75688 479 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 SNUPNO95149 360 aaKnown RBP10.24□□□□□ -0.77
VRK3-210ENST00000596121 CELA3AP09093 270 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 KITP10721 976 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 PRPS2P11908 318 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 ZNF24P17028 368 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 MAPK1P28482 360 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 PTGDSP41222 190 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 ASMTP46597 345 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms