RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PPICP45877 212 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 NCBP2P52298 156 aaKnown RBP eCLIP15.96■□□□□ 0.155e-7■■□□□ 14
IRF3-208ENST00000594387 FBXW4P57775 412 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 PLCXD2Q0VAA5 305 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 MGAT2Q10469 447 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 LTB4RQ15722 352 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 ZNF628Q5EBL2 1059 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 ARL13AQ5H913 290 aaPredicted RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 NUP54Q7Z3B4 507 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 NUDCD3Q8IVD9 361 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 PRR22Q8IZ63 422 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 OR9A2Q8NGT5 310 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 SPPL2AQ8TCT8 520 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 PHF10Q8WUB8 498 aaKnown RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 ITLN2Q8WWU7 325 aaPredicted RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 KAT2AQ92830 837 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 C11orf24Q96F05 449 aaPredicted RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 MECRQ9BV79 373 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 ITPAQ9BY32 194 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 NXF5Q9H1B4 397 aaKnown RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 SH2D2AQ9NP31 389 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 PLSCR2Q9NRY7 297 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 QPCTLQ9NXS2 382 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 ACAD8Q9UKU7 415 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 RAB21Q9UL25 225 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 TMED5Q9Y3A6 229 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 USP9YO00507 2555 aaPredicted RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 ARHGAP21Q5T5U3 1957 aa15.96■□□□□ 0.15
IRF3-208ENST00000594387 SETXQ7Z333 2677 aaKnown RBP15.96■□□□□ 0.15
IRF3-208ENST00000594387 NPIPA2E9PIF3 369 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 NPIPA3F8WFD2 350 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 SUSD5O60279 629 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 HCN1O60741 890 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 COQ9O75208 318 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 ABCD3P28288 659 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 MAPK1P28482 360 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 NNATQ16517 81 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 GALNTL6Q49A17 601 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 SH2D4BQ5SQS7 431 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 KANK2Q63ZY3 851 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 HIST2H2BCQ6DN03 193 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 FAM71E1Q6IPT2 247 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 RNF165Q6ZSG1 346 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 TMCO6Q96DC7 493 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 DTNBP1Q96EV8 351 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 PHF12Q96QT6 1004 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 CHST11Q9NPF2 352 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 TAS2R7Q9NYW3 318 aa15.95■□□□□ 0.14
IRF3-208ENST00000594387 CNOT11Q9UKZ1 510 aaKnown RBP15.95■□□□□ 0.14
IRF3-208ENST00000594387 KLF2Q9Y5W3 355 aaPredicted RBP15.95■□□□□ 0.14
IRF3-208ENST00000594387 SPTAN1Q13813 2472 aaKnown RBP15.95■□□□□ 0.14
IRF3-208ENST00000594387 CACNA1DQ01668 2161 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TRGV5A0A0B4J1U4 118 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 FRG2CA6NGY1 282 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 FIGNL2A6NMB9 653 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TMEM114B3SHH9 223 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ZNHIT1O43257 154 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 REM1O75628 298 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 LRATO95237 230 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 CBX7O95931 251 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 IGHG3P01860 377 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 JUNP05412 331 aaKnown RBP15.94■□□□□ 0.14
IRF3-208ENST00000594387 BPGMP07738 259 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ABCB1P08183 1280 aaPredicted RBP15.94■□□□□ 0.14
IRF3-208ENST00000594387 GDF1P27539 372 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 COL8A1P27658 744 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 EMDP50402 254 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 MRPS22P82650 360 aaKnown RBP15.94■□□□□ 0.14
IRF3-208ENST00000594387 DUSP2Q05923 314 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ZNF844Q08AG5 666 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 FOXO1Q12778 655 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TOMM20Q15388 145 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ZNHIT3Q15649 155 aaPredicted RBP15.94■□□□□ 0.14
IRF3-208ENST00000594387 CEBPEQ15744 281 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 WLSQ5T9L3 541 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 SP5Q6BEB4 398 aaPredicted RBP15.94■□□□□ 0.14
IRF3-208ENST00000594387 C3P1Q6ZMU1 363 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TRILQ7L0X0 811 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ZFP28Q8NHY6 868 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 AGR3Q8TD06 166 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TWIST2Q8WVJ9 160 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 OMA1Q96E52 524 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 PPP3R2Q96LZ3 170 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 RILPQ96NA2 401 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 ANGPTL4Q9BY76 406 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 TNFRSF12AQ9NP84 129 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 KCNK9Q9NPC2 374 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 KLRF1Q9NZS2 232 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 OR10H1Q9Y4A9 318 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 DNAJC15Q9Y5T4 150 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 RELNP78509 3460 aa15.94■□□□□ 0.14
IRF3-208ENST00000594387 SPENQ96T58 3664 aaKnown RBP15.93■□□□□ 0.14
IRF3-208ENST00000594387 MYO1GB0I1T2 1018 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 NPIPB8E9PQR5 432 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 AQP7O14520 342 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 PLOD3O60568 738 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ABCB7O75027 752 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ERN1O75460 977 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms