RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 FKBP1BP68106 108 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ITGA9Q13797 1035 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 IL18Q14116 193 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 P2RY6Q15077 328 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 NCF4Q15080 339 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 CHRNA6Q15825 494 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ODF4Q2M2E3 257 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 NKAIN1Q4KMZ8 207 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 IFI44LQ53G44 452 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ARMC12Q5T9G4 340 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 KRT39Q6A163 491 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 OR6B2Q6IFH4 312 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 MFSD12Q6NUT3 480 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 NHLRC1Q6VVB1 395 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF600Q6ZNG1 722 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 CENPVQ7Z7K6 275 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-216ENST00000593223 TMPRSS11BQ86T26 416 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 C12orf56Q8IXR9 622 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 EID3Q8N140 333 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 MAPKAPK5-AS1Q8N8E1 139 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 TMEM178AQ8NBL3 297 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 OR11H4Q8NGC9 324 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 OR10T2Q8NGX3 314 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ERMNQ8TAM6 284 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ATP8B4Q8TF62 1192 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ATL1Q8WXF7 558 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF560Q96MR9 790 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 SPATA13Q96N96 652 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 NECTIN4Q96NY8 510 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 PCDHB18PQ96TA0 734 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 JPH2Q9BR39 696 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-216ENST00000593223 PIGQQ9BRB3 760 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 SYNDIG1Q9H7V2 258 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 CNOT10Q9H9A5 744 aaKnown RBP4.35□□□□□ -1.71
SMAD4-216ENST00000593223 RNPEPL1Q9HAU8 725 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 SPACA1Q9HBV2 294 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 SDHAF3Q9NRP4 125 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 FGF21Q9NSA1 209 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 PNPLA3Q9NST1 481 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 PRMT7Q9NVM4 692 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-216ENST00000593223 KLHL8Q9P2G9 620 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-216ENST00000593223 LRWD1Q9UFC0 647 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 KIAA1257Q9ULG3 409 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 SNX7Q9UNH6 387 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF318Q5VUA4 2279 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 NCOR2Q9Y618 2525 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF831Q5JPB2 1677 aa4.35□□□□□ -1.71
SMAD4-216ENST00000593223 A0A1B0GTQ1 180 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 FEZF1A0PJY2 475 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ERICH2A1L162 156 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 GSAPA4D1B5 854 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 LGALS8O00214 317 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 TEX28O15482 410 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SPRY1O43609 319 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 CDC123O75794 336 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 NADKO95544 446 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 CSTAP01040 98 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 GH1P01241 217 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 UQCRFS1P1P0C7P4 283 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 RNF224P0DH78 156 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 CALCBP10092 127 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 CA8P35219 290 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 CETN2P41208 172 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 RPL21P46778 160 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 MAPK12P53778 367 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 MTTPP55157 894 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PRMT2P55345 433 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ERVK11-1P61568 191 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SNRPD1P62314 119 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 DR1Q01658 176 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 GCNT1Q02742 428 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SPP2Q13103 211 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SRSF5Q13243 272 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 TPD52L1Q16890 204 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 EPC2Q52LR7 807 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 TAF1BQ53T94 588 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SYT14P1Q58G82 188 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 MACC1Q6ZN28 852 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PHLDB2Q86SQ0 1253 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 RTN4RL2Q86UN3 420 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PIGZQ86VD9 579 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SERPINA12Q8IW75 414 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 RNF10Q8N5U6 811 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 UXS1Q8NBZ7 420 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PAQR8Q8TEZ7 354 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 WBP2Q969T9 261 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ISG20Q96AZ6 181 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 SNRNP40Q96DI7 357 aaKnown RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF558Q96NG5 402 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ANKRD27Q96NW4 1050 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 TRIM62Q9BVG3 475 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PANK2Q9BZ23 570 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ATG10Q9H0Y0 220 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 P2RY12Q9H244 342 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF701Q9NV72 531 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 TMEM161AQ9NX61 479 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 P4HTMQ9NXG6 502 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 MBD2Q9UBB5 411 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 PRELID1Q9Y255 219 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms