RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TAGAPQ8N103 731 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 SLC15A4Q8N697 577 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 MDS2Q8NDY4 140 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 VPS37AQ8NEZ2 397 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 ADIPOR1Q96A54 375 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 CHMP6Q96FZ7 201 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 TRIM45Q9H8W5 580 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-221ENST00000593026 C3orf14Q9HBI5 128 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 NEUROD4Q9HD90 331 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
DDX39A-221ENST00000593026 HPF1Q9NWY4 346 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 LUZP4Q9P127 313 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 TRIM33Q9UPN9 1127 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 ERVK-11Q9UQG0 969 aa13.81□□□□□ -0.2
DDX39A-221ENST00000593026 EMC8O43402 210 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 ZNF354AO60765 605 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 ERN1O75460 977 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NEURL1O76050 574 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 OR6B1O95007 311 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PSMG1O95456 288 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NADKO95544 446 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 ABCB1P08183 1280 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NCF2P19878 526 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PPICP45877 212 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 MRPL19P49406 292 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 DGKQP52824 942 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 WNT3P56703 355 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NRG3P56975 720 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 IRX1P78414 480 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PRR5P85299 388 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 31.6
DDX39A-221ENST00000593026 NNATQ16517 81 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PLEKHN1Q494U1 663 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 COLEC12Q5KU26 742 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 IL20RBQ6UXL0 311 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 CLECL1Q8IZS7 167 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 CYP4Z2PQ8N1L4 340 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 ZNF843Q8N446 348 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NUP43Q8NFH3 380 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PSMA8Q8TAA3 256 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 TMEM125Q96AQ2 219 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 LCORQ96JN0 433 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 VSTM2LQ96N03 204 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 MS4A4EQ96PG1 132 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 SIGLEC12Q96PQ1 595 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 NXF5Q9H1B4 397 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 FOLH1BQ9HBA9 442 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 EQTNQ9NQ60 294 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 SIRT3Q9NTG7 399 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 ZCCHC3Q9NUD5 404 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 FAM120CQ9NX05 1096 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PCDHGB4Q9UN71 923 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
DDX39A-221ENST00000593026 COPG1Q9Y678 874 aaKnown RBP13.8□□□□□ -0.2
DDX39A-221ENST00000593026 PRSS51A0A1B0GVH4 220 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 FRG2CA6NGY1 282 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ACOX3O15254 700 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 SCN2BO60939 215 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 NME6O75414 186 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-221ENST00000593026 SLC25A12O75746 678 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 C1QL1O75973 258 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 IL6P05231 212 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 PGRP06401 933 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 CD46P15529 392 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 DRD5P21918 477 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 SOAT1P35610 550 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ATP4BP51164 291 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ARFIP2P53365 341 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 PRKAG1P54619 331 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 HBA1P69905 142 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 PHC1P78364 1004 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 SQLEQ14534 574 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ZNHIT3Q15649 155 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-221ENST00000593026 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 PAOXQ6QHF9 649 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 TMEM64Q6YI46 380 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 ANKRD46Q86W74 232 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 OR9I1Q8NGQ6 314 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
DDX39A-221ENST00000593026 HSPBAP1Q96EW2 488 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 BTBD9Q96Q07 612 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 CXorf36Q9H7Y0 433 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 NTMQ9P121 344 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 KLHL14Q9P2G3 628 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 GPR55Q9Y2T6 319 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-221ENST00000593026 NPFFR2Q9Y5X5 522 aa13.79□□□□□ -0.2
DDX39A-221ENST00000593026 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 B8ZZF3 427 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 SORBS2O94875 1100 aaKnown RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 FBXO45P0C2W1 286 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 LSP1P33241 339 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 CCT3P49368 545 aaKnown RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 TMED10P49755 219 aaKnown RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 CORO7P57737 925 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms