RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 IL23RQ5VWK5 629 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM198Q66K66 360 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ANKRD26P1Q6NSI1 321 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 CLEC18BQ6UXF7 455 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 RGS9BPQ6ZS82 235 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SZRD1Q7Z422 152 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SLC22A16Q86VW1 577 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 LIX1Q8N485 282 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 CLEC18CQ8NCF0 446 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF675Q8TD23 568 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SSC4DQ8WTU2 575 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 DIO2Q92813 273 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 HSPBAP1Q96EW2 488 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZBED6CLQ96FA7 236 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 LCORQ96JN0 433 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 C1orf50Q9BV19 199 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 NXF5Q9H1B4 397 aaKnown RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 DEFB127Q9H1M4 99 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 METTL7AQ9H8H3 244 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 TAS2R9Q9NYW1 312 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 TAS2R7Q9NYW3 318 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SUCOQ9UBS9 1254 aaKnown RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 GIMAP2Q9UG22 337 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF639Q9UID6 485 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 BOKQ9UMX3 212 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 OR10H1Q9Y4A9 318 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PRRC2CQ9Y520 2896 aaKnown RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 SPENQ96T58 3664 aaKnown RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 MYO1GB0I1T2 1018 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF354AO60765 605 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 SEMA7AO75326 666 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ERN1O75460 977 aaKnown RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 SLITRK5O94991 958 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 CBX7O95931 251 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 DRD5P21918 477 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 IL12BP29460 328 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 PPICP45877 212 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 MASP1P48740 699 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 EMDP50402 254 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 TDGF1P3P51864 188 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 PRKAG1P54619 331 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 FBXW4P57775 412 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 BST1Q10588 318 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 HSPB3Q12988 150 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 C4orf17Q53FE4 359 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 TBCELQ5QJ74 424 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 C1QL3Q5VWW1 255 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM107Q6UX40 140 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 BNC2Q6ZN30 1099 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 FJX1Q86VR8 437 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF781Q8N8C0 355 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF441Q8N8Z8 693 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ZFP62Q8NB50 900 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 C17orf47Q8NEP4 570 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 OR10G3Q8NGC4 313 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ADIPOR1Q96A54 375 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 CTHRC1Q96CG8 243 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 MTERF3Q96E29 417 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 OMA1Q96E52 524 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 C3orf30Q96M34 536 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 AMDHD1Q96NU7 426 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 DOHHQ9BU89 302 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 GLIPR2Q9H4G4 154 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 LDAHQ9H6V9 325 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 MANSC1Q9H8J5 431 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 IL1RL2Q9HB29 575 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 C3orf14Q9HBI5 128 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 DEPPQ9NTK1 212 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 ATAD3AQ9NVI7 634 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 PNPOQ9NVS9 261 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 THAP1Q9NVV9 213 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 B4GALT7Q9UBV7 327 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 SHANK1Q9Y566 2161 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 NOTCH2Q04721 2471 aa9.28□□□□□ -0.92
BRCA1-227ENST00000591849 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 A0A087WV62 115 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 FRG2CA6NGY1 282 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CCL21O00585 134 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PRRG2O14669 202 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CFLARO15519 480 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PLOD3O60568 738 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SLC19A2O60779 497 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PPM1BO75688 479 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 STSP08842 583 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 KITP10721 976 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 NAGAP17050 411 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ABCD3P28288 659 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ARRB2P32121 409 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PTGS2P35354 604 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 MC3RP41968 323 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SLC18A1P54219 525 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 WDR4P57081 412 aaKnown RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 MRPS22P82650 360 aaKnown RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 HSF1Q00613 529 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms