RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ASPGQ86U10 573 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 SPNS2Q8IVW8 549 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TBC1D19Q8N5T2 526 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 RFLNBQ8N5W9 214 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 C3orf56Q8N813 242 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ANKRD42Q8N9B4 389 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CAMKVQ8NCB2 501 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TMEM52Q8NDY8 209 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ZPLD1Q8TCW7 415 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 SLC13A3Q8WWT9 602 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS25-204ENST00000589577 NXNL1Q96CM4 212 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 STARD4Q96DR4 205 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TRMT61AQ96FX7 289 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 ZFP3Q96NJ6 502 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 FAM111AQ96PZ2 611 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 MCMBPQ9BTE3 642 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CAPS2Q9BXY5 557 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 PCBD2Q9H0N5 130 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 C12orf65Q9H3J6 166 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 ALG9Q9H6U8 611 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ZNF696Q9H7X3 374 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CHODLQ9H9P2 273 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 EML4Q9HC35 981 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 PNO1Q9NRX1 252 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 ABCF3Q9NUQ8 709 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TMEM184CQ9NVA4 438 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 NUDT4Q9NZJ9 180 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CPSF2Q9P2I0 782 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 CLCF1Q9UBD9 225 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 XPR1Q9UBH6 696 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CNOT11Q9UKZ1 510 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 LIPT1Q9Y234 373 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 STK38LQ9Y2H1 464 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 OARD1Q9Y530 152 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CHCHD2Q9Y6H1 151 aaPredicted RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 PLCE1Q9P212 2302 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 A0A1W2PPM1 405 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 FRG2CA6NGY1 282 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 NCF1BA6NI72 391 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 ELOA3DA6NLF2 546 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 NCF1CA8MVU1 366 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 PSIP1O75475 530 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 CRCPO75575 148 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SMNDC1O75940 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS25-204ENST00000589577 SASH3O75995 380 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 VENTXO95231 258 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 GUCA1CO95843 209 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 HPNP05981 417 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SLC35G6P0C7Q6 338 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ZNF888P0CJ79 500 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 NCF1P14598 390 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 CPA3P15088 417 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CD1DP15813 335 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ALOX12P18054 663 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ATP5F1P24539 256 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 ALDH3A1P30838 453 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 GRK3P35626 688 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CDK9P50750 372 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 NAGLUP54802 743 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ALDH18A1P54886 795 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 DIO3P55073 304 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 RNF4P78317 190 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CDKL1Q00532 357 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 IRF9Q00978 393 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SLC18A2Q05940 514 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SQLEQ14534 574 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SF3B4Q15427 424 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS25-204ENST00000589577 TGFBIQ15582 683 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ELOA3BQ3SY89 546 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 EIPR1Q53HC9 387 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 BEX5Q5H9J7 111 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 SLC22A10Q63ZE4 541 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ATG16L1Q676U5 607 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CYB5R2Q6BCY4 276 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 METTL2BQ6P1Q9 378 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 OPN5Q6U736 354 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 HSDL2Q6YN16 418 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 EXOC3L1Q86VI1 746 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 NUDCD3Q8IVD9 361 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CENPLQ8N0S6 344 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 BANPQ8N9N5 519 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ELOA3Q8NG57 546 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 GIMAP7Q8NHV1 300 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 RAB3IL1Q8TBN0 382 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 MGARPQ8TDB4 240 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 TCP10LQ8TDR4 215 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 PTPMT1Q8WUK0 201 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 ASB11Q8WXH4 323 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 NEUROG1Q92886 237 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 ATP6V1E2Q96A05 226 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 TLCD1Q96CP7 247 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 THAP11Q96EK4 314 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 PLPPR2Q96GM1 343 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 UBXN10Q96LJ8 280 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 JSRP1Q96MG2 331 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 UCN2Q96RP3 112 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms