RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 BTBD2Q9BX70 525 aa11.29□□□□□ -0.6
CCBE1-203ENST00000589116 EXD2Q9NVH0 621 aa11.29□□□□□ -0.6
CCBE1-203ENST00000589116 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
CCBE1-203ENST00000589116 MMACHCQ9Y4U1 282 aa11.29□□□□□ -0.6
CCBE1-203ENST00000589116 SCN2AQ99250 2005 aa11.29□□□□□ -0.6
CCBE1-203ENST00000589116 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 A0A0G2JPF8 293 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 A0A1B0GX78 115 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 HNRNPCL2B2RXH8 293 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 HNRNPCL3B7ZW38 293 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SOCS2O14508 198 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 FLRT2O43155 660 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 COQ9O75208 318 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SERPINB7O75635 380 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SOX30O94993 753 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 OPN1SWP03999 348 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 GP1BAP07359 652 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 HNRNPCL4P0DMR1 293 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 GALNSP34059 522 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SOX18P35713 384 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 XCR1P46094 333 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 VLDLRP98155 873 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 TRA2AQ13595 282 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 NRF1Q16656 503 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 EXOSC6Q5RKV6 272 aaKnown RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 LAIR1Q6GTX8 287 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 OR2T5Q6IEZ7 315 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SLC44A2Q8IWA5 706 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 GALNT12Q8IXK2 581 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 VWA5B2Q8N398 1253 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 OR10Q1Q8NGQ4 319 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 OR2T29Q8NH02 315 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 ADAMTS15Q8TE58 950 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 C7orf34Q96L11 122 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 GFM1Q96RP9 751 aaKnown RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 TREX2Q9BQ50 279 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 RBCK1Q9BYM8 510 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 SYNDIG1Q9H7V2 258 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 NDOR1Q9UHB4 597 aa11.28□□□□□ -0.6
CCBE1-203ENST00000589116 TMEM184BQ9Y519 407 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-203ENST00000589116 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 SYNDIG1LA6NDD5 238 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 EI24O14681 340 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 CASC3O15234 703 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 DENRO43583 198 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 MFN2O95140 757 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 HPRP00739 348 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 ITGA2P17301 1181 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 FBLP22087 321 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 KCNC4Q03721 635 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 MGAT2Q10469 447 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 FUT5Q11128 374 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 SYPL1Q16563 259 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 SYT16Q17RD7 645 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 IQCCQ4KMZ1 466 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 TRMT12Q53H54 448 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 RPS26P11Q5JNZ5 115 aaPredicted RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 HEPHL1Q6MZM0 1159 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 RHBDD2Q6NTF9 364 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 SHISA5Q8N114 240 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 CDRT4Q8N9R6 151 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 OR5K1Q8NHB7 308 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 SPPL2AQ8TCT8 520 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 RBM18Q96H35 190 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 CNDP2Q96KP4 475 aaKnown RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 DGAT2Q96PD7 388 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF347Q96SE7 839 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 YIPF4Q9BSR8 244 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 OSBPL10Q9BXB5 764 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 CXorf21Q9HAI6 301 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 GIN1Q9NXP7 522 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 IFT80Q9P2H3 777 aaPredicted RBP11.27□□□□□ -0.6
CCBE1-203ENST00000589116 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 PCDHGB3Q9Y5G1 929 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.6
CCBE1-203ENST00000589116 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 D6RAR5 112 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 G3V2T6 193 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 hCG_2039718K7EN88 272 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 PDLIM1O00151 329 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 E2F6O75461 281 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 LDOC1O95751 146 aaPredicted RBP11.27□□□□□ -0.61
CCBE1-203ENST00000589116 CD247P20963 164 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ALAS2P22557 587 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms