RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KRT6BP04259 564 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 IL3P08700 152 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 BMP5P22003 454 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 UQCRC1P31930 480 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 PTGDSP41222 190 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 KRT6CP48668 564 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
VMP1-206ENST00000587945 PLCXD2Q0VAA5 305 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 RASA2Q15283 850 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 HSPB2Q16082 182 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 TIGD3Q6B0B8 471 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 VASNQ6EMK4 673 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 SCIMPQ6UWF3 145 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 ANGPTL8Q6UXH0 198 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 GPRIN3Q6ZVF9 776 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 ZZZ3Q8IYH5 903 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 CTHRC1Q96CG8 243 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 TMEM41AQ96HV5 264 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 LCORQ96JN0 433 aaPredicted RBP13.1□□□□□ -0.31
VMP1-206ENST00000587945 ZNF382Q96SR6 550 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 FAIM2Q9BWQ8 316 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 UGT2B28Q9BY64 529 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 UTS2RQ9UKP6 389 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 CFL2Q9Y281 166 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 DLGAP4Q9Y2H0 992 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 ZNF780BQ9Y6R6 833 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 EML6Q6ZMW3 1958 aa13.1□□□□□ -0.31
VMP1-206ENST00000587945 INTS1Q8N201 2190 aaKnown RBP13.1□□□□□ -0.31
VMP1-206ENST00000587945 RIPK2O43353 540 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 ICOSLGO75144 302 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 ABHD2P08910 425 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 FAM153BP0C7A2 387 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 NAGAP17050 411 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 BMP7P18075 431 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 PTPN6P29350 595 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
VMP1-206ENST00000587945 EMDP50402 254 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 NAGLUP54802 743 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
VMP1-206ENST00000587945 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 FAM153CQ494X1 144 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 NUP54Q7Z3B4 507 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 FAM83FQ8NEG4 500 aaPredicted RBP13.09□□□□□ -0.31
VMP1-206ENST00000587945 OR1J4Q8NGS1 313 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 METTL6Q8TCB7 284 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 KAT2AQ92830 837 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
VMP1-206ENST00000587945 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 APIPQ96GX9 242 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 WDYHV1Q96HA8 205 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 TRIB1Q96RU8 372 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 OSBPL11Q9BXB4 747 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 PRDM14Q9GZV8 571 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 SERHLQ9NQF3 203 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 TIMM22Q9Y584 194 aa13.09□□□□□ -0.31
VMP1-206ENST00000587945 CELSR1Q9NYQ6 3014 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 SYT5O00445 386 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 SNPHO15079 494 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 ACOX3O15254 700 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PCDH7O60245 1069 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 ULK1O75385 1050 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PYGBP11216 843 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 HSD3B1P14060 373 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 IMPDH1P20839 514 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 ATP5F1P24539 256 aaPredicted RBP13.08□□□□□ -0.32
VMP1-206ENST00000587945 HSD3B2P26439 372 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 HMOX2P30519 316 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 KIR2DL3P43628 341 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PPICP45877 212 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 AGFG1P52594 562 aaKnown RBP13.08□□□□□ -0.32
VMP1-206ENST00000587945 ZNF136P52737 540 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PRKAA2P54646 552 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 BTKQ06187 659 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 CSTF3Q12996 717 aaKnown RBP13.08□□□□□ -0.32
VMP1-206ENST00000587945 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 TRMT10CQ7L0Y3 403 aaKnown RBP13.08□□□□□ -0.32
VMP1-206ENST00000587945 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PM20D2Q8IYS1 436 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 RDH11Q8TC12 318 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 C16orf78Q8WTQ4 265 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 ABTB1Q969K4 478 aaPredicted RBP13.08□□□□□ -0.32
VMP1-206ENST00000587945 TMBIM1Q969X1 311 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 EBPLQ9BY08 206 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 KLRF1Q9NZS2 232 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 HIVEP1P15822 2718 aa13.08□□□□□ -0.32
VMP1-206ENST00000587945 SPG11Q96JI7 2443 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms