RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PEX14O75381 377 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FGBP02675 491 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CHRM4P08173 479 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KHKP50053 298 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 UBE3AQ05086 875 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DUSP6Q16828 381 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MRGPREQ86SM8 312 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ISYNA1Q9NPH2 558 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC35C2Q9NQQ7 365 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 YARS2Q9Y2Z4 477 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A0A0G2JN53 185 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 IRGMA1A4Y4 181 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 WASHC1A8K0Z3 465 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CENPXA8MT69 81 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TFECO14948 347 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PPM1DO15297 605 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CHRM5P08912 532 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RPS25P62851 125 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 FUT5Q11128 374 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ADAMTSL4Q6UY14 1074 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 WASH2PQ6VEQ5 465 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 UTS2BQ765I0 119 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LRRTM4Q86VH4 590 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SUN3Q8TAQ9 357 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ING5Q8WYH8 240 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MMP28Q9H239 520 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RERGLQ9H628 205 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 EGLN3Q9H6Z9 239 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HEATR5BQ9P2D3 2071 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CASC3O15234 703 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TMCC2O75069 709 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CLEC3AO75596 197 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CLTBP09497 229 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.277e-7■■■■□ 23.5
CDK5RAP3-237ENST00000585163 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GPR19Q15760 415 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TBRG1Q3YBR2 411 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PDZK1Q5T2W1 519 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 C6orf183Q5T699 404 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC27A4Q6P1M0 643 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC36A4Q6YBV0 504 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RTL10Q7L3V2 364 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LINC01555Q8NAE3 123 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 KIAA1143Q96AT1 154 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 OTUB1Q96FW1 271 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 C17orf62Q9BQA9 187 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 AICDAQ9GZX7 198 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 C11orf54Q9H0W9 315 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CTPS2Q9NRF8 586 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PTPRSQ13332 1948 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A0A087WUU8 490 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 LRIT2A6NDA9 550 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MAN2B1O00754 1011 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC30A4O14863 429 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 POLR1CO15160 346 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 APOL3O95236 402 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ADH1CP00326 375 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ACRP10323 421 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CEBPBP17676 345 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 BUD31P41223 144 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SSR2P43308 183 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MTNR1AP48039 350 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TAS2R38P59533 333 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DAB2P98082 770 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GNA13Q14344 377 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF628Q5EBL2 1059 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TMEM64Q6YI46 380 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF730Q6ZMV8 503 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GRASPQ7Z6J2 395 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 TEX47Q8TBZ9 253 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CXorf40AQ8TE69 158 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 AP3S1Q92572 193 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 SAP130Q9H0E3 1048 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CCDC182A6NF36 153 aa13.36□□□□□ -0.27
CDK5RAP3-237ENST00000585163 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms