RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 FMO6PO60774 539 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TADA2AO75478 443 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 B3GALNT1O75752 331 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 BCAS2O75934 225 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 NKX2-2O95096 273 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TNNC2P02585 160 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 APRTP07741 180 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 FAM58BPP0C7Q3 252 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 IDO1P14902 403 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PDGFRAP16234 1089 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF182P17025 639 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ME2P23368 584 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PTAFRP25105 342 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TNFSF9P41273 254 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SERPINB8P50452 374 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CDK9P50750 372 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ALDH3A2P51648 485 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 AQP4P55087 323 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ADARP55265 1226 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CDH6P55285 790 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DYNLT1P63172 113 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 HPCAP84074 193 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 MYBPC1Q00872 1141 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SCN1BQ07699 218 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 INCA1Q0VD86 236 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TRAP1Q12931 704 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PPIL2Q13356 520 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SNTB1Q13884 538 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 NFE2L1Q14494 772 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TRIP10Q15642 601 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 STXBP2Q15833 593 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DPYSL2Q16555 572 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF239Q16600 458 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 KYAT1Q16773 422 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF699Q32M78 642 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 NADK2Q4G0N4 442 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PIGGQ5H8A4 983 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SPANXN3Q5MJ09 141 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 N4BP2L1Q5TBK1 243 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 IYDQ6PHW0 289 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TRAT1Q6PIZ9 186 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM135Q86UB9 458 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 HPS6Q86YV9 775 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PSTKQ8IV42 348 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 C10orf107Q8IVU9 208 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CDKL3Q8IVW4 592 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DEFB107AQ8IZN7 70 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PGAM4Q8N0Y7 254 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 BBS5Q8N3I7 341 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 GBGT1Q8N5D6 347 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ARL6IP6Q8N6S5 226 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 EMC1Q8N766 993 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 HM13Q8TCT9 377 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 FAM222BQ8WU58 562 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PDCD6IPQ8WUM4 868 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PYDC1Q8WXC3 89 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SEPT1Q8WYJ6 367 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM143Q96AN5 459 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CFAP36Q96G28 342 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DCUN1D1Q96GG9 259 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ANKRD36BP1Q96IX9 119 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 C12orf42Q96LP6 360 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 FER1L6-AS2Q96M78 137 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 HARBI1Q96MB7 349 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 BIRC8Q96P09 236 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CPNE1Q99829 537 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SLX1AQ9BQ83 275 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 FERMT1Q9BQL6 677 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CABLES2Q9BTV7 478 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ACAT2Q9BWD1 397 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 CALN1Q9BXU9 219 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 MRPL1Q9BYD6 325 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 NFKBIZQ9BYH8 718 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ELOVL4Q9GZR5 314 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DRC3Q9H069 523 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ILKAPQ9H0C8 392 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ASB7Q9H672 318 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 COG4Q9H9E3 785 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 EFCAB1Q9HAE3 211 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 UGT1A7Q9HAW7 530 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 UGT1A10Q9HAW8 530 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 UGT1A8Q9HAW9 530 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SLC38A7Q9NVC3 462 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 TMEM216Q9P0N5 145 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ABI3Q9P2A4 366 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 RCOR3Q9P2K3 495 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 FBXL17Q9UF56 701 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 RIMS3Q9UJD0 308 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 MOSPD1Q9UJG1 213 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 PTBP2Q9UKA9 531 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 BARX2Q9UMQ3 279 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF510Q9Y2H8 683 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 RIPK3Q9Y572 518 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SF3B1O75533 1304 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 DOCK5Q9H7D0 1870 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 MYH9P35579 1960 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SCN9AQ15858 1988 aa3.6□□□□□ -1.83
SMCHD1-208ENST00000583344 SSC5DA1L4H1 1573 aa3.59□□□□□ -1.83
SMCHD1-208ENST00000583344 PSME4Q14997 1843 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms