RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.04□□□□□ -0.8
NDEL1-208ENST00000580237 PHF3Q92576 2039 aaKnown RBP10.04□□□□□ -0.8
NDEL1-208ENST00000580237 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 A0A1B0GTH9 108 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ATP6AP2A0A1C7CYW4 349 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 TMEM114B3SHH9 223 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ACOX3O15254 700 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 PDPK1O15530 556 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 AKAP10O43572 662 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ATP6AP2O75787 350 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 SERPINE1P05121 402 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 DDX5P17844 614 aaKnown RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 SDC1P18827 310 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ABCD3P28288 659 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 GPC1P35052 558 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 HPCAL1P37235 193 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 MC3RP41968 323 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 MAGEA5P43359 124 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ASMTP46597 345 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 DCAF7P61962 342 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ATP6AP1LQ52LC2 224 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 TRMT12Q53H54 448 aaKnown RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 CMPK2Q5EBM0 449 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 HHATQ5VTY9 493 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 FAM71E1Q6IPT2 247 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 LYPD8Q6UX82 237 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 RNF165Q6ZSG1 346 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 EXOC3L1Q86VI1 746 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 TMEM251Q8N6I4 163 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 OR52N2Q8NGI0 321 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 CLHC1Q8NHS4 586 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ZFP28Q8NHY6 868 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 RELTQ969Z4 430 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ADIPOR1Q96A54 375 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ERP27Q96DN0 273 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 OMA1Q96E52 524 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 HSPBAP1Q96EW2 488 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 CCDC120Q96HB5 630 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 LCORQ96JN0 433 aaPredicted RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ANKRA2Q9H9E1 313 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 OR10H1Q9Y4A9 318 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 CHCHD2Q9Y6H1 151 aaPredicted RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 SETXQ7Z333 2677 aaKnown RBP10.03□□□□□ -0.8
NDEL1-208ENST00000580237 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
NDEL1-208ENST00000580237 FRG2CA6NGY1 282 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 LSM1O15116 133 aaKnown RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 BIRC5O15392 142 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ERN1O75460 977 aaKnown RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 PPM1BO75688 479 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 WISP2O76076 250 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 SLITRK5O94991 958 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 FGF4P08620 206 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 S1PR1P21453 382 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TACR1P25103 407 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 GDF1P27539 372 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 IL12BP29460 328 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ETV4P43268 484 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 SMSP52788 366 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 MGAT2Q10469 447 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 HSPB3Q12988 150 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 DUSP8Q13202 625 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TOMM20Q15388 145 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ZNHIT3Q15649 155 aaPredicted RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TMEM198Q66K66 360 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TMEM107Q6UX40 140 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 RPTNQ6XPR3 784 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 C3P1Q6ZMU1 363 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 SLC34A3Q8N130 599 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 LIX1Q8N485 282 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 FNDC5Q8NAU1 212 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 SIMC1Q8NDZ2 872 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 OR7G2Q8NG99 324 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 CTHRC1Q96CG8 243 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TUBGCP3Q96CW5 907 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 PGM2Q96G03 612 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 RILPQ96NA2 401 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 C1orf50Q9BV19 199 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TUBB1Q9H4B7 451 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF703Q9H7S9 590 aaPredicted RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ZFP64Q9NPA5 681 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 KLRF1Q9NZS2 232 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 SH3BP4Q9P0V3 963 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF639Q9UID6 485 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 CNOT11Q9UKZ1 510 aaKnown RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 CCL27Q9Y4X3 112 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 ACTL7BQ9Y614 415 aa10.02□□□□□ -0.81
NDEL1-208ENST00000580237 NUP214P35658 2090 aaPredicted RBP10.02□□□□□ -0.81
NDEL1-208ENST00000580237 MYO1GB0I1T2 1018 aa10.01□□□□□ -0.81
NDEL1-208ENST00000580237 NPIPA2E9PIF3 369 aa10.01□□□□□ -0.81
NDEL1-208ENST00000580237 NPIPB8E9PQR5 432 aa10.01□□□□□ -0.81
NDEL1-208ENST00000580237 NPIPA3F8WFD2 350 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms