RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TYK2P29597 1187 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 NKX6-1P78426 367 aaPredicted RBP16.32■□□□□ 0.2
MKS1-209ENST00000580127 MAP4K2Q12851 820 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 MROH9Q5TGP6 573 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 AAGABQ6PD74 315 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 CHMP1BQ7LBR1 199 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 YRDCQ86U90 279 aaKnown RBP16.32■□□□□ 0.2
MKS1-209ENST00000580127 PRR22Q8IZ63 422 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 LCORQ96JN0 433 aaPredicted RBP16.32■□□□□ 0.2
MKS1-209ENST00000580127 BRINP2Q9C0B6 783 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 NOL11Q9H8H0 719 aaKnown RBP16.32■□□□□ 0.2
MKS1-209ENST00000580127 PRODH2Q9UF12 536 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 RBP1P09455 135 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 INHBBP09529 407 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 DRD5P21918 477 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 GPX3P22352 226 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 GMPRP36959 345 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 SRYQ05066 204 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 LTBQ06643 244 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 TRIM42Q8IWZ5 723 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 CENPLQ8N0S6 344 aaPredicted RBP16.31■□□□□ 0.2
MKS1-209ENST00000580127 SMPDL3BQ92485 455 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 FAIM2Q9BWQ8 316 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 OSBPL11Q9BXB4 747 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 NXF5Q9H1B4 397 aaKnown RBP16.31■□□□□ 0.2
MKS1-209ENST00000580127 ELOVL6Q9H5J4 265 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 ZNF780BQ9Y6R6 833 aa16.31■□□□□ 0.2
MKS1-209ENST00000580127 A0A096LPK6 155 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 SH3D21A4FU49 640 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 KDM4EB2RXH2 506 aaPredicted RBP16.3■□□□□ 0.2
MKS1-209ENST00000580127 SNPHO15079 494 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 ERAL1O75616 437 aaKnown RBP16.3■□□□□ 0.2
MKS1-209ENST00000580127 BCAS2O75934 225 aaPredicted RBP16.3■□□□□ 0.2
MKS1-209ENST00000580127 CT62P0C5K7 136 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 HOXC12P31275 282 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 PPICP45877 212 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 PSPHP78330 225 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 MRPS25P82663 173 aaKnown RBP16.3■□□□□ 0.2
MKS1-209ENST00000580127 PLCXD2Q0VAA5 305 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 MILR1Q7Z6M3 343 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 LUZP2Q86TE4 346 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 P3H2Q8IVL5 708 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 C9orf106Q8NAJ2 232 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 WFDC11Q8NEX6 87 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 SPATA4Q8NEY3 305 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 OMA1Q96E52 524 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 UCN2Q96RP3 112 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 NTMT1Q9BV86 223 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 PCDHA9Q9Y5H5 950 aa16.3■□□□□ 0.2
MKS1-209ENST00000580127 RAD51CO43502 376 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 ABCB7O75027 752 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 SMIM24O75264 130 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 ATP1B1P05026 303 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 S1PR1P21453 382 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 PHBP35232 272 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 KRT20P35900 424 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 SERPINB8P50452 374 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 UAP1Q16222 522 aaPredicted RBP16.29■□□□□ 0.2
MKS1-209ENST00000580127 SLC48A1Q6P1K1 146 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 PIGTQ969N2 578 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 INTS12Q96CB8 462 aaKnown RBP16.29■□□□□ 0.2
MKS1-209ENST00000580127 MRRFQ96E11 262 aaKnown RBP16.29■□□□□ 0.2
MKS1-209ENST00000580127 TUBA1CQ9BQE3 449 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 LRRC1Q9BTT6 524 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 VPS11Q9H270 941 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
MKS1-209ENST00000580127 SERHLQ9NQF3 203 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 GALNT8Q9NY28 637 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 TAS2R10Q9NYW0 307 aa16.29■□□□□ 0.2
MKS1-209ENST00000580127 MRPS18CQ9Y3D5 142 aaKnown RBP16.29■□□□□ 0.2
MKS1-209ENST00000580127 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 LRRC14BA6NHZ5 514 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 REM1O75628 298 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 SIX3O95343 332 aaPredicted RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 HRGP04196 525 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 CRHP06850 196 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 FEN1P39748 380 aaKnown RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 MRPS22P82650 360 aaKnown RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 IRF9Q00978 393 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 PRICKLE4Q2TBC4 344 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 SGO1Q5FBB7 561 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 OR2A2Q6IF42 318 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 CLEC9AQ6UXN8 241 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 P4HA3Q7Z4N8 544 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 GRAMD2AQ8IUY3 354 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 SAMD14Q8IZD0 417 aaPredicted RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 METTL4Q8N3J2 472 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 GBP7Q8N8V2 638 aaPredicted RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 ADCY4Q8NFM4 1077 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 RDH11Q8TC12 318 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 FBXO25Q8TCJ0 367 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 HGDQ93099 445 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 PHF21BQ96EK2 531 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 COL21A1Q96P44 957 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms