RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 HTR2BP41595 481 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 GZMKP49863 264 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 GALK2Q01415 458 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 BICRALQ6AI39 1079 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 ADGRF3Q8IZF5 1079 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 PLA2G15Q8NCC3 412 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SUN3Q8TAQ9 357 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 FUZQ9BT04 418 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 MTG2Q9H4K7 406 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TBC1D17Q9HA65 648 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CTPS2Q9NRF8 586 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 SIRT3Q9NTG7 399 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 NLKQ9UBE8 527 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 CCL26Q9Y258 94 aa10.16□□□□□ -0.78
CCDC40-207ENST00000572253 TMA7Q9Y2S6 64 aaKnown RBP10.16□□□□□ -0.78
CCDC40-207ENST00000572253 NDUFS4O43181 175 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 HPGDSO60760 199 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 SLC19A2O60779 497 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 UBXN7O94888 489 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 C1QBP02746 253 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 CXCL10P02778 98 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 CTSLP07711 333 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 WEE1P30291 646 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PRKAG1P54619 331 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PCBP4P57723 403 aaKnown RBP10.15□□□□□ -0.78
CCDC40-207ENST00000572253 FABP5Q01469 135 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 LY6G5CQ5SRR4 150 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PARS2Q7L3T8 475 aaKnown RBP10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PIGXQ8TBF5 258 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 HDHD2Q9H0R4 259 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PAK6Q9NQU5 681 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-207ENST00000572253 AGRPO00253 132 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 CASC3O15234 703 aaKnown RBP10.15□□□□□ -0.78
CCDC40-207ENST00000572253 SLC43A1O75387 559 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 TALDO1P37837 337 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 CAV3P56539 151 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ADAM15Q13444 863 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 NFE2L1Q14494 772 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 TRAM2Q15035 370 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 BTBD16Q32M84 506 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PAMR1Q6UXH9 720 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF767PQ75MW2 155 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 LIX1LQ8IVB5 337 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 CADM2Q8N3J6 435 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ZFP41Q8N8Y5 198 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 NEIL3Q8TAT5 605 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 DEDD2Q8WXF8 326 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF764Q96H86 408 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-207ENST00000572253 GDF15Q99988 308 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 TMED9Q9BVK6 235 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 STMN3Q9NZ72 180 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 TEKT2Q9UIF3 430 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 GPR52Q9Y2T5 361 aa10.15□□□□□ -0.78
CCDC40-207ENST00000572253 PRNPP04156 253 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 SYN1P17600 705 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 SSR2P43308 183 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 CAP1Q01518 475 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 CAMK2BQ13554 666 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 EFR3AQ14156 821 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.79
CCDC40-207ENST00000572253 ADCK2Q7Z695 626 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 C11orf96Q7Z7L8 435 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 LHFPL3Q86UP9 236 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 RAB42Q8N4Z0 105 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 DUSP18Q8NEJ0 188 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 OR5D16Q8NGK9 328 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 OR2L2Q8NH16 312 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 ZDHHC5Q9C0B5 715 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 EGLN3Q9H6Z9 239 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 CACYBPQ9HB71 228 aaKnown RBP10.15□□□□□ -0.79
CCDC40-207ENST00000572253 ADAM29Q9UKF5 820 aa10.15□□□□□ -0.79
CCDC40-207ENST00000572253 SF3B6Q9Y3B4 125 aaKnown RBP10.15□□□□□ -0.79
CCDC40-207ENST00000572253 INMT-MINDY4F8WBC2 141 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OR2B3O76000 313 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 HLA-DQB1P01920 261 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 DRD2P14416 443 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PPM1AP35813 382 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OPRD1P41143 372 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 NCBP2P52298 156 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 FAM46CQ5VWP2 391 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OR6T1Q8NGN1 323 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TFGQ92734 400 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 COQ10AQ96MF6 247 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PINK1Q9BXM7 581 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 BCL2L10Q9HD36 194 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 KLHL28Q9NXS3 571 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 GPR34Q9UPC5 381 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 MYOFQ9NZM1 2061 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PLXNA2O75051 1894 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 A0A0G2JPF8 293 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 HNRNPCL2B2RXH8 293 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 HNRNPCL3B7ZW38 293 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 CCL16O15467 120 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 HNRNPCL4P0DMR1 293 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 CELP19835 753 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ACADLP28330 430 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms