RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 STATHP02808 62 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 LIMS3P0CW19 117 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 LIMS4P0CW20 117 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 IL12RB1P42701 662 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 AVPR1BP47901 424 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 SLC6A11P48066 632 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 EFNB1P98172 346 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 COL9A2Q14055 689 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-205ENST00000571272 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-205ENST00000571272 C17orf64Q86WR6 236 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 TP53I13Q8NBR0 393 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-205ENST00000571272 MORN4Q8NDC4 146 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 FGF11Q92914 225 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 SLC35G5Q96KT7 338 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 PRAP1Q96NZ9 151 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 CNIH4Q9P003 139 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 ACADMP11310 421 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 HLA-DMAP28067 261 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 ACADLP28330 430 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 RAB40BQ12829 278 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 DDX53Q86TM3 631 aaKnown RBP16.46■□□□□ 0.23
SCARF1-205ENST00000571272 ANKK1Q8NFD2 765 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 OR4F15Q8NGB8 312 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 MED18Q9BUE0 208 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 MS4A8Q9BY19 250 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 PPP1R3EQ9H7J1 279 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 LHX9Q9NQ69 397 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 ZCCHC3Q9NUD5 404 aaKnown RBP16.46■□□□□ 0.23
SCARF1-205ENST00000571272 RBFOX1Q9NWB1 397 aaKnown RBP16.46■□□□□ 0.23
SCARF1-205ENST00000571272 CLCA2Q9UQC9 943 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 SLC9A8Q9Y2E8 581 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 WNT6Q9Y6F9 365 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 A0A0G2JMP0 313 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 LOC102723532A0A0G2JNH3 316 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 SHISA3A0PJX4 238 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 TSPAN11A1L157 253 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 GABRA5P31644 462 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 C1orf94Q6P1W5 598 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF557Q8N988 423 aaPredicted RBP16.46■□□□□ 0.23
SCARF1-205ENST00000571272 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 OR8D4Q8NGM9 314 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 TMEM163Q8TC26 289 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 SETD7Q8WTS6 366 aaKnown RBP16.46■□□□□ 0.23
SCARF1-205ENST00000571272 UPRTQ96BW1 309 aa16.46■□□□□ 0.23
SCARF1-205ENST00000571272 C2orf92A0A1B0GVN3 265 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 TMEM129A0AVI4 362 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 CELP19835 753 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 PPP3R1P63098 170 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 WSCD2Q2TBF2 565 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SLC25A30Q5SVS4 291 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SLC27A4Q6P1M0 643 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 B3GLCTQ6Y288 498 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SLC36A4Q6YBV0 504 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 TEX47Q8TBZ9 253 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SNAPC3Q92966 411 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 TRIM63Q969Q1 353 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 KIAA1143Q96AT1 154 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-205ENST00000571272 A0A087WUU8 490 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 LYRM1O43325 122 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 DDX5P17844 614 aaKnown RBP16.45■□□□□ 0.22
SCARF1-205ENST00000571272 ERP29P30040 261 aaKnown RBP16.45■□□□□ 0.22
SCARF1-205ENST00000571272 PPP2R1BP30154 601 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 CTBP2P56545 445 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 UBE3AQ05086 875 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 LCTLQ6UWM7 567 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 CD300LDQ6UXZ3 194 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 MARCH9Q86YJ5 346 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 ZFAND1Q8TCF1 268 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 RAD51AP1Q96B01 352 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SENP5Q96HI0 755 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-205ENST00000571272 ARHGAP9Q9BRR9 750 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 GLIPR2Q9H4G4 154 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 EPHX3Q9H6B9 360 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 TRPV5Q9NQA5 729 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 SAGE1Q9NXZ1 904 aa16.45■□□□□ 0.22
SCARF1-205ENST00000571272 A0A0X1KG70 313 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 ZNF780AO75290 641 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 CXCL10P02778 98 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 CHRM4P08173 479 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 PRKAR1AP10644 381 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 GZMKP49863 264 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 TEAD2Q15562 447 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 NDUFA9Q16795 377 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 PRICKLE2Q7Z3G6 844 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 PEX5LQ8IYB4 626 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 TCTE3Q8IZS6 198 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 DTX3Q8N9I9 347 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 KLK6Q92876 244 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 ATF6BQ99941 703 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 ZCCHC2Q9C0B9 1178 aaKnown RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 TRIM45Q9H8W5 580 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 FGF20Q9NP95 211 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 MCUBQ9NWR8 336 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 HCFC2Q9Y5Z7 792 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 CD8B2A6NJW9 211 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 HCN1O60741 890 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 CD8BP10966 210 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 INPP1P49441 399 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 LASP1Q14847 261 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms