RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 DPY30Q9C005 99 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 ERVK-19Q9WJR5 959 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 PCDHGB6Q9Y5F9 930 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 FBN3Q75N90 2809 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 A0A0G2JND7 137 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 GABRR3A8MPY1 467 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 C9JVG2 144 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 UBDO15205 165 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 ALDOCP09972 364 aaKnown RBP12.33□□□□□ -0.44
CCDC40-205ENST00000571028 CT62P0C5K7 136 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 SOX11P35716 441 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 AP2B1P63010 937 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 ABHD17BQ5VST6 288 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 MYO7BQ6PIF6 2116 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 TMEM200AQ86VY9 491 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 EID3Q8N140 333 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 OR9A2Q8NGT5 310 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 OR14A16Q8NHC5 309 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 CEP70Q8NHQ1 597 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 M1APQ8TC57 530 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 ACTRT2Q8TDY3 377 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 KAT2AQ92830 837 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 DEFB126Q9BYW3 111 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 LIN28AQ9H9Z2 209 aaKnown RBP12.33□□□□□ -0.44
CCDC40-205ENST00000571028 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 EHD3Q9NZN3 535 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 WBP11Q9Y2W2 641 aaKnown RBP12.33□□□□□ -0.44
CCDC40-205ENST00000571028 MEMO1Q9Y316 297 aa12.33□□□□□ -0.44
CCDC40-205ENST00000571028 NIPBLQ6KC79 2804 aaeCLIP12.33□□□□□ -0.44
CCDC40-205ENST00000571028 A0A1W2PQ72 361 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 SYNDIG1LA6NDD5 238 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 OR5H15A6NDH6 313 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 SCAMP2O15127 329 aaKnown RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 PDPK1O15530 556 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 TGDSO95455 350 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 WDPCPO95876 746 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 TROVE2P10155 538 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ABOP16442 354 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 PCSK2P16519 638 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 SSTR4P31391 388 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CLCN2P51788 898 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CLDN8P56748 225 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 UFM1P61960 85 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 GNGT1P63211 74 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 MRPS35P82673 323 aaKnown RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 PMP22Q01453 160 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 HSPB3Q12988 150 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 BIKQ13323 160 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 EXOSC7Q15024 291 aaKnown RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CDSNQ15517 529 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 SMU1Q2TAY7 513 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CPTPQ5TA50 214 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF551Q7Z340 670 aaPredicted RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 R3HCC1LQ7Z5L2 792 aaKnown RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 FAM9CQ8IZT9 166 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 MORN4Q8NDC4 146 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 C7orf57Q8NEG2 295 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF721Q8TF20 911 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 VMP1Q96GC9 406 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 MAELQ96JY0 434 aaKnown RBP12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF681Q96N22 645 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 TMUB1Q9BVT8 246 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ENKD1Q9H0I2 346 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CDCP1Q9H5V8 836 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 ANKRA2Q9H9E1 313 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 CXorf21Q9HAI6 301 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 MMP25Q9NPA2 562 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 AIG1Q9NVV5 245 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 COPS7AQ9UBW8 275 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
CCDC40-205ENST00000571028 PRKNO60260 465 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 MAN1A2O60476 641 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 LAMP1P11279 417 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 NCF2P19878 526 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 PRPS1L1P21108 318 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 MPIP34949 423 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 GPC1P35052 558 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 RPL3P39023 403 aaKnown RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 SEC24CP53992 1094 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 OGFOD2Q6N063 350 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 SPPL2CQ8IUH8 684 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 SAMD14Q8IZD0 417 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 APCDD1LQ8NCL9 501 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 SDCCAG3Q96C92 435 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 ART5Q96L15 291 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 GAL3ST4Q96RP7 486 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 PRPF18Q99633 342 aaKnown RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 TMEM120AQ9BXJ8 343 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 RNF32Q9H0A6 362 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 GLIPR2Q9H4G4 154 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms