RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CDC42EP4Q9H3Q1 356 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 FAM124BQ9H5Z6 455 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 C10orf88Q9H8K7 445 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RPF1Q9H9Y2 349 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 CYP3A43Q9HB55 503 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MRPL17Q9NRX2 175 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 CISHQ9NSE2 258 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 NKIRAS1Q9NYS0 192 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 KIAA1257Q9ULG3 409 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 AGTPBP1Q9UPW5 1226 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RPH3AQ9Y2J0 694 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 TDRKHQ9Y2W6 561 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 R4GN57 208 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 PTPRJQ12913 1337 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 UMODL1Q5DID0 1318 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 IGKV6-21A0A0C4DH24 114 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 PLSCR5A0PG75 271 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ANKDD1BA6NHY2 528 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SIGLEC16A6NMB1 481 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ANKRD65E5RJM6 399 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 H3BMM5 538 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GOLGA8SH3BPF8 625 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SGK1O00141 431 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 DNALI1O14645 258 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 MAGEB2O15479 319 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 ABHD2P08910 425 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 FRMD6-AS1P0C7T7 363 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 IGHV4-31P0DP07 118 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GHRP10912 638 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 KRT3P12035 628 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GOT1P17174 413 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 PSMA2P25787 234 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 MAPK3P27361 379 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 MARK3P27448 753 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 CDH5P33151 784 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 PHBP35232 272 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 CD86P42081 329 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 MAGEA4P43358 317 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SLCO1A2P46721 670 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GLIPR1P48060 266 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 IFNAR2P48551 515 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 LUMP51884 338 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 ART1P52961 327 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 VCPP55072 806 aaKnown RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 CCNA1P78396 465 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 IL9RQ01113 521 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SLC34A1Q06495 639 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 PPIL2Q13356 520 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 TFDP2Q14188 446 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 PDK1Q15118 436 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 TRIP13Q15645 432 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 C2CD6Q53TS8 623 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 C9orf57Q5W0N0 161 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 RUSC1-AS1Q66K80 236 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 NADSYN1Q6IA69 706 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SCARA5Q6ZMJ2 495 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 CENPUQ71F23 418 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GPR141Q7Z602 305 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ZNF410Q86VK4 478 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 TDHQ8IZJ6 230 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 CNPY4Q8N129 248 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 METTL27Q8N6F8 245 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 ALLCQ8N6M5 410 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 GBP7Q8N8V2 638 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 MAB21L3Q8N8X9 362 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 LRTM2Q8N967 370 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ZNF383Q8NA42 475 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 POC1AQ8NBT0 407 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 DMBX1Q8NFW5 382 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 KBTBD8Q8NFY9 601 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 URGCPQ8TCY9 931 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SECTM1Q8WVN6 248 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SCRN2Q96FV2 425 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 PRMT1Q99873 361 aaKnown RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 ALKBH7Q9BT30 221 aaPredicted RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 NFKBIZQ9BYH8 718 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ABCG8Q9H221 673 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 LHX5Q9H2C1 402 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 UBQLN3Q9H347 655 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 TFB2MQ9H5Q4 396 aaKnown RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 ASB7Q9H672 318 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 CHST11Q9NPF2 352 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 NINJ2Q9NZG7 142 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 SENP1Q9P0U3 644 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 LGALS13Q9UHV8 139 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 KCNK6Q9Y257 313 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 ZNF510Q9Y2H8 683 aa3.34□□□□□ -1.87
UBR1-211ENST00000569971 STRAPQ9Y3F4 350 aaKnown RBP3.34□□□□□ -1.87
UBR1-211ENST00000569971 COL1A2P08123 1366 aa3.34□□□□□ -1.88
UBR1-211ENST00000569971 LRRC37A2A6NM11 1700 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 DOCK5Q9H7D0 1870 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 WDR81Q562E7 1941 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 hCG_1818297A0A087WSY0 165 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 TMEM120BA0PK00 339 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 MAGEB16A2A368 324 aa3.33□□□□□ -1.88
UBR1-211ENST00000569971 EME2A4GXA9 379 aaPredicted RBP3.33□□□□□ -1.88
UBR1-211ENST00000569971 CFAP73A6NFT4 308 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms