RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 REEP5Q00765 189 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 MAP4K2Q12851 820 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TOR1AIP1Q5JTV8 583 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CLEC12AQ5QGZ9 265 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 IQCHQ86VS3 1027 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TP53I13Q8NBR0 393 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CCL4L1Q8NHW4 92 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ZCCHC10Q8TBK6 192 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 OTULINQ96BN8 352 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ARSGQ96EG1 525 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CNPPD1Q9BV87 410 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 RHBGQ9H310 441 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SYNPO2LQ9H987 977 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PELI2Q9HAT8 420 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 GPR52Q9Y2T5 361 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PLXNA2O75051 1894 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CCDC88CQ9P219 2028 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 A0A1W2PR48 441 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SERPINB7O75635 380 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TMEM11P17152 192 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PPP2R1BP30154 601 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 NTSP30990 170 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SNRPNP63162 240 aaKnown RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ID2Q02363 134 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 LTB4RQ15722 352 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TBCEQ15813 527 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF362Q5T0B9 420 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SHFQ7M4L6 423 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 MFSD4AQ8N468 514 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ACOT4Q8N9L9 421 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 FAM83FQ8NEG4 500 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 DENND6BQ8NEG7 585 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 OR6T1Q8NGN1 323 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 S100ZQ8WXG8 99 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 RAB7BQ96AH8 199 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 AMDHD1Q96NU7 426 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 C6orf106Q9H6K1 298 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 P2RX2Q9UBL9 471 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ICKQ9UPZ9 632 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TRANK1O15050 2925 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 POM121BA6NF01 834 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CLDN24A6NM45 220 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 BTN3A3O00478 584 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 LRRTM2O43300 516 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 EML2O95834 649 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 DLGAP3O95886 979 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CH25HO95992 272 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 GABRB1P18505 474 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 FCARP24071 287 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 AVPR1BP47901 424 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TGM4P49221 684 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 BLVRAP53004 296 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 CSNK2BP67870 215 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 BTN3A2P78410 334 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 STK11Q15831 433 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 BCL2A1Q16548 175 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PODNL1Q6PEZ8 512 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ENPP7Q6UWV6 458 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SLC46A3Q7Z3Q1 461 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TMEFF1Q8IYR6 380 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SHISA5Q8N114 240 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 FRMD1Q8N878 549 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 POC5Q8NA72 575 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 FAM46DQ8NEK8 389 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 OR9A2Q8NGT5 310 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 OR10G6Q8NH81 332 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 TSACCQ96A04 125 aaPredicted RBP8.26□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF354BQ96LW1 612 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 BTBD2Q9BX70 525 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 SLC17A9Q9BYT1 436 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 WASH6PQ9NQA3 447 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 RWDD3Q9Y3V2 267 aa8.26□□□□□ -1.09
LINC00558-201ENST00000569422 PTPRSQ13332 1948 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 PLXND1Q9Y4D7 1925 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF860A6NHJ4 632 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CPSF4LA6NMK7 179 aaKnown RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 ZAR1LA6NP61 321 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 DSCR3O14972 297 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 KIAA0513O60268 411 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SEMA3DO95025 777 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 EIF2S1P05198 315 aaKnown RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CEACAM5P06731 702 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CHRM4P08173 479 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 OSMP13725 252 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 MC3RP41968 323 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 RFX3P48380 749 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 KCNJ5P48544 419 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 OLR1P78380 273 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 ARHGAP19Q14CB8 494 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 PPA1Q15181 289 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 INAVAQ3KP66 663 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms