RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CLDN18P56856 261 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 PHEXP78562 749 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 NNATQ16517 81 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 HMBOX1Q6NT76 420 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 PODNL1Q6PEZ8 512 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 ZNF474Q6S9Z5 364 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 ZNF550Q7Z398 422 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 NUP54Q7Z3B4 507 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 P4HA3Q7Z4N8 544 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 MYLK4Q86YV6 388 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 PHC2Q8IXK0 858 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 WDSUB1Q8N9V3 476 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 ACTRT1Q8TDG2 376 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 TMEM171Q8WVE6 324 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 IGFBPL1Q8WX77 278 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 HGDQ93099 445 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 SFXN2Q96NB2 322 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 NODALQ96S42 347 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 PIGQQ9BRB3 760 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 SLC39A3Q9BRY0 314 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 MCMBPQ9BTE3 642 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 ZNF701Q9NV72 531 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 ELOVL5Q9NYP7 299 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 OPTCQ9UBM4 332 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 CFL2Q9Y281 166 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 TSC22D4Q9Y3Q8 395 aa10.69□□□□□ -0.7
GTF3C1-209ENST00000568569 A0A1W2PS29 197 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 PRAMEF25A6NGN4 478 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 C16orf97H3BN30 126 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 ACOX3O15254 700 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 IFNA2P01563 188 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 NID1P14543 1247 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 STMN1P16949 149 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 NT5EP21589 574 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 IVDP26440 423 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 CNTFP26441 200 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 SRD5A2P31213 254 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 BSGP35613 385 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 KCNJ5P48544 419 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 STARP49675 285 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 ATP5J2P56134 94 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 ARL4CP56559 192 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 PLCXD2Q0VAA5 305 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 CUL3Q13618 768 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 DESI1Q6ICB0 168 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 HEPHL1Q6MZM0 1159 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 BTLAQ7Z6A9 289 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 NUDT13Q86X67 352 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 ANKMY2Q8IV38 441 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 UBTD2Q8WUN7 234 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 REPS1Q96D71 796 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 OMA1Q96E52 524 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 PGM2Q96G03 612 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 ZC3HAV1LQ96H79 300 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 OPN3Q9H1Y3 402 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 NUDT4Q9NZJ9 180 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 DTX4Q9Y2E6 619 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 MTO1Q9Y2Z2 717 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 PCDHGA11Q9Y5H2 935 aa10.68□□□□□ -0.7
GTF3C1-209ENST00000568569 DSCAMO60469 2012 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 SLC22A20A6NK97 555 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 PGRMC2O15173 223 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 UGT2B11O75310 529 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 C8BP07358 591 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 EPB42P16452 691 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 XKP51811 444 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 TNK1Q13470 666 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 CAPRIN1Q14444 709 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 LIPJQ5W064 366 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 PLCZ1Q86YW0 608 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 FBXO36Q8NEA4 188 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 OR4K14Q8NGD5 310 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 STAG3L4Q8TBR4 150 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 LCORQ96JN0 433 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 UBXN10Q96LJ8 280 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 ITPAQ9BY32 194 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 DDX47Q9H0S4 455 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 ALG9Q9H6U8 611 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 EHD3Q9NZN3 535 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 TXNDC16Q9P2K2 825 aa10.67□□□□□ -0.7
GTF3C1-209ENST00000568569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 LRRC14BA6NHZ5 514 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 SUPT3HB4E1H0 165 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 H0YIV9 168 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 KERAO60938 352 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 SUPT3HO75486 399 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 PIAS1O75925 651 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 SOX30O94993 753 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 GBAP04062 536 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 TP53P04637 393 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 CD8BP10966 210 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 CPMP14384 443 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 S1PR1P21453 382 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms