RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OR51I1Q9H343 314 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF696Q9H7X3 374 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 FAM60AQ9NP50 221 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 NAALAD2Q9Y3Q0 740 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 PCDHGB3Q9Y5G1 929 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
COMMD4-221ENST00000567935 A0A087WV62 115 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 CYR61O00622 381 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 B4GALT2O60909 372 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 GPR75O95800 540 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 BCHEP06276 602 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 ALPPL2P10696 532 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 CPMP14384 443 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 ETS2P15036 469 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 PNLIPP16233 465 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 PORP16435 677 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 FAM180BQ6P0A1 224 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 KMT5CQ86Y97 462 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 SPACA3Q8IXA5 215 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 CA13Q8N1Q1 262 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 TTC29Q8NA56 475 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 SPPL2AQ8TCT8 520 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 RUBCNLQ9H714 662 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 TRIM45Q9H8W5 580 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 UCKL1Q9NWZ5 548 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 NLGN3Q9NZ94 848 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 SEMA5BQ9P283 1151 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 LRIT1Q9P2V4 623 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 TRPC4Q9UBN4 977 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
COMMD4-221ENST00000567935 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 RNF215Q9Y6U7 377 aa13.7□□□□□ -0.22
COMMD4-221ENST00000567935 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 FITM1A5D6W6 292 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 A8MVJ9 347 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 TMEM229AB2RXF0 380 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 PRAMEF10O60809 474 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 SDC3O75056 442 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 NSA2O95478 260 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 CER1O95813 267 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 C9P02748 559 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ATP1B1P05026 303 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 MSL3P1P0C860 447 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 NR2F1P10589 423 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 RNH1P13489 461 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 GABRA4P48169 554 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 PPM1FP49593 454 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ADARB1P78563 741 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 HLA-BQ31612 363 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 IQCCQ4KMZ1 466 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 TMEM107Q6UX40 140 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 TMPRSS12Q86WS5 348 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 NUP43Q8NFH3 380 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 OR9A2Q8NGT5 310 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF675Q8TD23 568 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 PROX1Q92786 737 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 FKBP10Q96AY3 582 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 TGM7Q96PF1 710 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ACTRT3Q9BYD9 372 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 YTHDF1Q9BYJ9 559 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 SERHL2Q9H4I8 314 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 EXD2Q9NVH0 621 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 ABCG2Q9UNQ0 655 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 MRPS2Q9Y399 296 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
COMMD4-221ENST00000567935 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 SCN3AQ9NY46 2000 aa13.69□□□□□ -0.22
COMMD4-221ENST00000567935 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 DOPEY2Q9Y3R5 2298 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 IGHV1OR21-1A0A087WYE8 117 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 H0YIG0 161 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 hCG_2039718K7EN88 272 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 PLOD3O60568 738 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 DNAJB5O75953 348 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 MFN2O95140 757 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 IFNW1P05000 195 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 C8orf89P0DMQ9 161 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 RHCEP18577 417 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 EPHA8P29322 1005 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 MC3RP41968 323 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 AVPR1BP47901 424 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 CASP9P55211 416 aa13.68□□□□□ -0.22
COMMD4-221ENST00000567935 RPS26P62854 115 aaKnown RBP13.68□□□□□ -0.22
COMMD4-221ENST00000567935 BIKQ13323 160 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms