RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MRPS22P82650 360 aaKnown RBP17.03■□□□□ 0.32
LINC01238-205ENST00000567549 RASA2Q15283 850 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 FLYWCH1Q4VC44 716 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 TIGD3Q6B0B8 471 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 VASNQ6EMK4 673 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
LINC01238-205ENST00000567549 ABTB1Q969K4 478 aaPredicted RBP17.03■□□□□ 0.32
LINC01238-205ENST00000567549 MTBPQ96DY7 904 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 ZFP3Q96NJ6 502 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 OSBPL11Q9BXB4 747 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 UBQLN3Q9H347 655 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 CALHM2Q9HA72 323 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 PFDN4Q9NQP4 134 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 KLRF1Q9NZS2 232 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 VPS29Q9UBQ0 182 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 FREM3P0C091 2139 aa17.03■□□□□ 0.32
LINC01238-205ENST00000567549 CBR3O75828 277 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.32
LINC01238-205ENST00000567549 DRD2P14416 443 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 H2AFXP16104 143 aaPredicted RBP17.02■□□□□ 0.32
LINC01238-205ENST00000567549 DNASE1P24855 282 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 CSTF3Q12996 717 aaKnown RBP17.02■□□□□ 0.32
LINC01238-205ENST00000567549 PRICKLE4Q2TBC4 344 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 SGO1Q5FBB7 561 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 IFT20Q8IY31 132 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 ZZZ3Q8IYH5 903 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 PLD6Q8N2A8 252 aaKnown RBP17.02■□□□□ 0.32
LINC01238-205ENST00000567549 DOK4Q8TEW6 326 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 FOXC2Q99958 501 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 C1QTNF3Q9BXJ4 246 aa17.02■□□□□ 0.32
LINC01238-205ENST00000567549 CLEC4MQ9H2X3 399 aaPredicted RBP17.02■□□□□ 0.32
LINC01238-205ENST00000567549 ANKHD1Q8IWZ3 2542 aaKnown RBP17.01■□□□□ 0.31
LINC01238-205ENST00000567549 CELSR1Q9NYQ6 3014 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 EXPH5Q8NEV8 1989 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 WASHC1A8K0Z3 465 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 TRIM49D1C9J1S8 452 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 POC1B-GALNT4F8VUJ3 575 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 LRATO95237 230 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 IL18BPO95998 194 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ABCB1P08183 1280 aaPredicted RBP17.01■□□□□ 0.31
LINC01238-205ENST00000567549 CYP4B1P13584 511 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 DRD5P21918 477 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 PPICP45877 212 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ALDH9A1P49189 494 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 PPP2R2AP63151 447 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 SORDQ00796 357 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 HEPACAMQ14CZ8 416 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 SPIN4Q56A73 249 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ANGPTL8Q6UXH0 198 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 TMEM64Q6YI46 380 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 LIX1LQ8IVB5 337 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 SLC22A9Q8IVM8 553 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ZPLD1Q8TCW7 415 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ZNF483Q8TF39 744 aaPredicted RBP17.01■□□□□ 0.31
LINC01238-205ENST00000567549 IFT81Q8WYA0 676 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 OMA1Q96E52 524 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 GNRHR2Q96P88 292 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 TRIB1Q96RU8 372 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 TM9SF2Q99805 663 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 NXF5Q9H1B4 397 aaKnown RBP17.01■□□□□ 0.31
LINC01238-205ENST00000567549 ZBTB26Q9HCK0 441 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 MCM8Q9UJA3 840 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 NCKAP5O14513 1909 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 SPG11Q96JI7 2443 aa17.01■□□□□ 0.31
LINC01238-205ENST00000567549 EXOC1LA0A1B0GW35 172 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 FRG2CA6NGY1 282 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 TUBAL3A6NHL2 446 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 GNB5O14775 395 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 ERN1O75460 977 aaKnown RBP17■□□□□ 0.31
LINC01238-205ENST00000567549 PDYNP01213 254 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 CT62P0C5K7 136 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 CTSSP25774 331 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 HMOX2P30519 316 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 FEN1P39748 380 aaKnown RBP17■□□□□ 0.31
LINC01238-205ENST00000567549 DLX5P56178 289 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 NAA20P61599 178 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 CLCQ05315 142 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 EFR3AQ14156 821 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 AAGABQ6PD74 315 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 CAMKMTQ7Z624 323 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 PRR22Q8IZ63 422 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 TNIP2Q8NFZ5 429 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 ZNF675Q8TD23 568 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 NSUN5Q96P11 429 aaKnown RBP17■□□□□ 0.31
LINC01238-205ENST00000567549 RASSF1Q9NS23 344 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 ZNF358Q9NW07 568 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 MAT2BQ9NZL9 334 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 SENP1Q9P0U3 644 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 UTS2RQ9UKP6 389 aa17■□□□□ 0.31
LINC01238-205ENST00000567549 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
LINC01238-205ENST00000567549 GNG14A0A1W2PPG7 69 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 MBD3L4A6NDZ8 208 aaPredicted RBP16.99■□□□□ 0.31
LINC01238-205ENST00000567549 MBD3L3A6NE82 208 aaPredicted RBP16.99■□□□□ 0.31
LINC01238-205ENST00000567549 PRAMEF25A6NGN4 478 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 OR6C70A6NIJ9 312 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 MBD3L5A6NJ08 208 aaPredicted RBP16.99■□□□□ 0.31
LINC01238-205ENST00000567549 A6NNC1 897 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 A8MT66 165 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 SNPHO15079 494 aa16.99■□□□□ 0.31
LINC01238-205ENST00000567549 ULK1O75385 1050 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms