RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 LINC00523Q86TU6 105 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 CATSPERDQ86XM0 798 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 PDSS2Q86YH6 399 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 TMPRSS6Q8IU80 811 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MISPQ8IVT2 679 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SHISA5Q8N114 240 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SLC25A41Q8N5S1 370 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FNDC5Q8NAU1 212 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 OR4D6Q8NGJ1 314 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 KCTD4Q8WVF5 259 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MUS81Q96NY9 551 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FCRL5Q96RD9 977 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 IL12RB2Q99665 862 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FSD1LQ9BXM9 530 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 HIPK2Q9H2X6 1198 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 AAR2Q9Y312 384 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FEZF1A0PJY2 475 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 TRPC5OSA6NMA1 111 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 LSM1O15116 133 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ZMPSTE24O75844 475 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ALX3O95076 343 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 PSMG1O95456 288 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FESP07332 822 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FAM87AP0C7U9 286 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 CDC34P49427 236 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ATP5J2P56134 94 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ARPP19P56211 112 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 CARTPTQ16568 116 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 RNLSQ5VYX0 342 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 VRK2Q86Y07 508 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MFSD6LQ8IWD5 586 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 OR5D13Q8NGL4 314 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FAM81AQ8TBF8 368 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MAPK15Q8TD08 544 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 LINC01599Q8WXQ3 324 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 RPL3LQ92901 407 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SLC41A3Q96GZ6 507 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ZFYVE19Q96K21 471 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 TRNT1Q96Q11 434 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 RAB40CQ96S21 281 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MYADMQ96S97 322 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 GPR22Q99680 433 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ALG12Q9BV10 488 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 GATA5Q9BWX5 397 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SEMA4CQ9C0C4 833 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 NEK6Q9HC98 313 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MYNNQ9NPC7 610 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 WNT16Q9UBV4 365 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FBXO4Q9UKT5 387 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 RPL26L1Q9UNX3 145 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 GOLGA8QA0A0J9YX86 632 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 NKX2-8O15522 239 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 PRAF2O60831 178 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 ANXA9O76027 345 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 CNTN5O94779 1100 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 PNLIPP16233 465 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 MVKQ03426 396 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 EFEMP1Q12805 493 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 FAM189A2Q15884 450 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 CARD17Q5XLA6 110 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 DPY19L3Q6ZPD9 716 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 C1orf87Q8N0U7 546 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 NDNFQ8TB73 568 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 STMN2Q93045 179 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SNRNP40Q96DI7 357 aaKnown RBP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 C1QTNF1Q9BXJ1 281 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 RHOJQ9H4E5 214 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 COG4Q9H9E3 785 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 UCK1Q9HA47 277 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 HACD3Q9P035 362 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SERTAD3Q9UJW9 196 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SNX7Q9UNH6 387 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 RUVBL2Q9Y230 463 aaKnown RBP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 UBE2J1Q9Y385 318 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 KCNU1A8MYU2 1149 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 J3KR12 359 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SDHDO14521 159 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 PSMD3O43242 534 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SSX5O60225 188 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 TRIM13O60858 407 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 LRP3O75074 770 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SLC35E2BP0CK96 405 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 CD1EP15812 388 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 AOC1P19801 751 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SLC1A2P43004 574 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 CCNG1P51959 295 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 GEMP55040 296 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 TNK1Q13470 666 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 LCTLQ6UWM7 567 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 CIR1Q86X95 450 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 ARHGAP24Q8N264 748 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 WDR20Q8TBZ3 569 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 TBC1D15Q8TC07 691 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
UBFD1-205ENST00000566136 NT5MQ9NPB1 228 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 SLC7A8Q9UHI5 535 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 TCAF1Q9Y4C2 921 aa9.98□□□□□ -0.81
UBFD1-205ENST00000566136 MYO7AQ13402 2215 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms