RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 E7ESA3 106 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 SAP18O00422 153 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 OR10H2O60403 315 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 CRLF1O75462 422 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 PRKRAO75569 313 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 CBR3O75828 277 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 CRHP06850 196 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 CCDC166P0CW27 439 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 ABCD3P28288 659 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 SSTR4P31391 388 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 BSGP35613 385 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 PTGDSP41222 190 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 MAGEA4P43358 317 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 GFRA1P56159 465 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 NRG3P56975 720 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 SETDB1Q15047 1291 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 FBXO48Q5FWF7 155 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 NUP54Q7Z3B4 507 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 VWA5B2Q8N398 1253 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 DOK4Q8TEW6 326 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 INTS12Q96CB8 462 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 OR2B2Q9GZK3 357 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 CDC42EP4Q9H3Q1 356 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 LYARQ9NX58 379 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 ZNF226Q9NYT6 803 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 PACSIN3Q9UKS6 424 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 EXO1Q9UQ84 846 aaKnown RBP11.59□□□□□ -0.55
RNF40-208ENST00000565995 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
RNF40-208ENST00000565995 TRIM64A6NGJ6 449 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 TRIM64BA6NI03 449 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 GNB5O14775 395 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 SNPHO15079 494 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 SMAD7O15105 426 aaKnown RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 HCRTR2O43614 444 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 TMCC2O75069 709 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 PPM1BO75688 479 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CNOT4O95628 575 aaKnown RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 PCNAP12004 261 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 S1PR1P21453 382 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 PTX3P26022 381 aaPredicted RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 PHBP35232 272 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CPA2P48052 419 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CUL3Q13618 768 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 TOMM20Q15388 145 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 HLA-DQA1Q5Y7H0 255 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 GRHL2Q6ISB3 625 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 YRDCQ86U90 279 aaKnown RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 OR7G1Q8NGA0 311 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 HUS1BQ8NHY5 278 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 UBTD2Q8WUN7 234 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 HGDQ93099 445 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 UCN3Q969E3 161 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CAVIN3Q969G5 261 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 STARD4Q96DR4 205 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CCL19Q99731 98 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CENPKQ9BS16 269 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 NINJ2Q9NZG7 142 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 CD274Q9NZQ7 290 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 C6orf203Q9P0P8 240 aaPredicted RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 RNF112Q9ULX5 631 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 DLGAP4Q9Y2H0 992 aa11.58□□□□□ -0.56
RNF40-208ENST00000565995 MTO1Q9Y2Z2 717 aaKnown RBP11.58□□□□□ -0.56
RNF40-208ENST00000565995 A0A1W2PNV4 684 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 TMPRSS11DO60235 418 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 ICOSLGO75144 302 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 SH3BGRLO75368 114 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 SOX30O94993 753 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 AIFM1O95831 613 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 CT62P0C5K7 136 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 FAM58BPP0C7Q3 252 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 GPX3P22352 226 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 GCKP35557 465 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 CD79BP40259 229 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 LHX2P50458 406 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 SLC12A2P55011 1212 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 CAPRIN1Q14444 709 aaKnown RBP11.57□□□□□ -0.56
RNF40-208ENST00000565995 LIPJQ5W064 366 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 ANGPTL8Q6UXH0 198 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 TRMT10CQ7L0Y3 403 aaKnown RBP11.57□□□□□ -0.56
RNF40-208ENST00000565995 TRIM42Q8IWZ5 723 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 RNF175Q8N4F7 328 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 SPATA6LQ8N4H0 392 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 WDSUB1Q8N9V3 476 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
RNF40-208ENST00000565995 TSPAN17Q96FV3 270 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 ELOVL5Q9NYP7 299 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 PCDHGA11Q9Y5H2 935 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
RNF40-208ENST00000565995 LRRC14BA6NHZ5 514 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 GLOD5A6NK44 160 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 H0Y3Z8 333 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 H0YIV9 168 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 K7EPI3 171 aa11.56□□□□□ -0.56
RNF40-208ENST00000565995 EEDO75530 441 aaKnown RBP11.56□□□□□ -0.56
RNF40-208ENST00000565995 NR2F6P10588 404 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms