RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FAM231BA6NCW3 169 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 PANO1I0J062 215 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 CACNB4O00305 520 aaPredicted RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 RANBP6O60518 1105 aaKnown RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 ACTL6AO96019 429 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 TCF7P36402 384 aaPredicted RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 ACADSBP45954 432 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 TRPC1P48995 793 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 HECTD3Q5T447 861 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 PRSS42Q7Z5A4 293 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 ADGRD2Q7Z7M1 963 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 NKAIN3Q8N8D7 197 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 TFB1MQ8WVM0 346 aaKnown RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 SDHCQ99643 169 aaPredicted RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 OSBPL8Q9BZF1 889 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 ACOXLQ9NUZ1 547 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 SLC2A6Q9UGQ3 507 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 FOXA2Q9Y261 457 aaPredicted RBP3.18□□□□□ -1.9
UBR1-205ENST00000564540 LRRK1Q38SD2 2015 aa3.18□□□□□ -1.9
UBR1-205ENST00000564540 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 SLC17A2O00624 439 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 SLC7A4O43246 635 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 HSPB1P04792 205 aaKnown RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 IGFBP5P24593 272 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 MAT2AP31153 395 aaKnown RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 ALDH3B2P48448 385 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 ZNF133P52736 654 aaPredicted RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 RNASE8Q8TDE3 154 aaKnown RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 ZNF799Q96GE5 643 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 TSPYL1Q9H0U9 437 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 TSPY26PQ9H489 355 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 APOBEC3BQ9UH17 382 aaKnown RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 CCPG1Q9ULG6 757 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 RPH3AQ9Y2J0 694 aaPredicted RBP3.17□□□□□ -1.9
UBR1-205ENST00000564540 CHD4Q14839 1912 aa3.17□□□□□ -1.9
UBR1-205ENST00000564540 TNRQ92752 1358 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 MFSD2BA6NFX1 497 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 EI24O14681 340 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 LCMT2O60294 686 aaKnown RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 PROS1P07225 676 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 HSP90AB1P08238 724 aaKnown RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 CTNNB1P35222 781 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 STX1BP61266 288 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 ROR1Q01973 937 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 ZIC1Q15915 447 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 GPAT3Q53EU6 434 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 FAM43BQ6ZT52 329 aaPredicted RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 TGIF2LYQ8IUE0 185 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 RAB39BQ96DA2 213 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 C16orf74Q96GX8 76 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 JAKMIP1Q96N16 626 aaKnown RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 ACCSQ96QU6 501 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 NMUR2Q9GZQ4 415 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 AKIRIN1Q9H9L7 192 aaPredicted RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 ZCCHC3Q9NUD5 404 aaKnown RBP3.16□□□□□ -1.9
UBR1-205ENST00000564540 VPS54Q9P1Q0 977 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 DPM3Q9P2X0 92 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 SYNJ2O15056 1496 aa3.16□□□□□ -1.9
UBR1-205ENST00000564540 C5orf51A6NDU8 294 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 SFTPBP07988 381 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 HOXC4P09017 264 aaPredicted RBP3.15□□□□□ -1.91
UBR1-205ENST00000564540 FCARP24071 287 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 POU3F4P49335 361 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 NME5P56597 212 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 RIPPLY3P57055 190 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 RPS8P62241 208 aaKnown RBP3.15□□□□□ -1.91
UBR1-205ENST00000564540 RCN2Q14257 317 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 PAGE2BQ5JRK9 111 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 ATRAIDQ6UW56 229 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 SLC22A16Q86VW1 577 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 C14orf178Q8N769 122 aaPredicted RBP3.15□□□□□ -1.91
UBR1-205ENST00000564540 OR4F17Q8NGA8 305 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 GDAP1Q8TB36 358 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 FNDC8Q8TC99 324 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 LHX4Q969G2 390 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 CFAP36Q96G28 342 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 GPR137Q96N19 417 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 OR4F4Q96R69 305 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 HCAR1Q9BXC0 346 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 HES7Q9BYE0 225 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 ELOVL4Q9GZR5 314 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 ZNF702PQ9H963 129 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 ERVK-18Q9QC07 812 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 STX8Q9UNK0 236 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 KLHDC2Q9Y2U9 406 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 RPGRIP1LQ68CZ1 1315 aa3.15□□□□□ -1.91
UBR1-205ENST00000564540 NPIPA5A0A0B4J1W7 369 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 NPIPA5E9PKD4 350 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 SLC28A1O00337 649 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 ZNF263O14978 683 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 ZNF861PO60384 105 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 CCDC166P0CW27 439 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 ZNF32P17041 273 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 IGHV1-2P23083 117 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 NT5C2P49902 561 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 UCNP55089 124 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 RAG2P55895 527 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 WNT4P56705 351 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 GNB2P62879 340 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms