RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SENP8Q96LD8 212 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CRAMP1Q96RY5 1269 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MRPS30Q9NP92 439 aaKnown RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 ELF5Q9UKW6 265 aaPredicted RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 GOLT1BQ9Y3E0 138 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TRDV1A0A1B0GX56 115 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 SLC22A31A6NKX4 558 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 C8GP07360 202 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ALPIP09923 528 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ARP10275 920 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 SPCS3P61009 180 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 UBE2KP61086 200 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ZBTB2Q8N680 514 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TRIB3Q96RU7 358 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 FEVQ99581 238 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 AARSD1Q9BTE6 412 aaKnown RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 TTPALQ9BTX7 342 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CDT1Q9H211 546 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 FBXO44Q9H4M3 255 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 LAMP5Q9UJQ1 280 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TMEM210A6NLX4 147 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MPTX1A8MV57 137 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TAAR5O14804 337 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ATG13O75143 517 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MED6O75586 246 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2C1O95371 312 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 GABRB1P18505 474 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 EDNRAP25101 427 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 LIPAP38571 399 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CTAG1AP78358 180 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 NHLH2Q02577 135 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 FABP9Q0Z7S8 132 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MOGAT2Q3SYC2 334 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 AFMIDQ63HM1 303 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 SFRP4Q6FHJ7 346 aaPredicted RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 XAF1Q6GPH4 301 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 LARP4Q71RC2 724 aaKnown RBP eCLIP5.97□□□□□ -1.45
CLK3-212ENST00000563418 KDF1Q8NAX2 398 aaPredicted RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR5M3Q8NGP4 307 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2T4Q8NH00 348 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 C16orf58Q96GQ5 468 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 SLC35A5Q9BS91 424 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TMEM39BQ9GZU3 492 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 DPP7Q9UHL4 492 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 SCML2Q9UQR0 700 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 PMS2P2O95744 297 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 HLA-DQA2P01906 255 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 FBP1P09467 338 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 RAB5AP20339 215 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 KDM4DQ6B0I6 523 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ZC3H14Q6PJT7 736 aaKnown RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 GALNT10Q86SR1 603 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 COMMD2Q86X83 199 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 TRAPPC5Q8IUR0 188 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 PNLDC1Q8NA58 520 aaKnown RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 CHST4Q8NCG5 386 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2T33Q8NG76 320 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CMTM7Q96FZ5 175 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 WFIKKN1Q96NZ8 548 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ABCC13Q9NSE7 274 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 FBXL2Q9UKC9 423 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MATN3O15232 486 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ELK1P19419 428 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 BDKRB2P30411 391 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 C1QTNF8P60827 252 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ZNF585AQ6P3V2 769 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ASPGQ86U10 573 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 LRRC56Q8IYG6 542 aaPredicted RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 ACBD7Q8N6N7 88 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 GNPDA2Q8TDQ7 276 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 NPRL2Q8WTW4 380 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 LRR1Q96L50 414 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 PCYT2Q99447 389 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 GPR21Q99679 349 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2AG1Q9H205 316 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 P2RX2Q9UBL9 471 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 EMCNQ9ULC0 261 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 GLAP06280 429 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 EBLN1P0CF75 366 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ENPP1P22413 925 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 BMPR1AP36894 532 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2B8PP59922 312 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CDK6Q00534 326 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 ST3GAL3Q11203 375 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 BAATQ14032 418 aaPredicted RBP5.97□□□□□ -1.45
CLK3-212ENST00000563418 TMEM86AQ8N2M4 240 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR8D4Q8NGM9 314 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 BCL2L14Q9BZR8 327 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 WWTR1Q9GZV5 400 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 CHRDQ9H2X0 955 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 APMAPQ9HDC9 416 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 OR2S2Q9NQN1 319 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MAN2C1Q9NTJ4 1040 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 MED9Q9NWA0 146 aa5.97□□□□□ -1.45
CLK3-212ENST00000563418 BAZ2AQ9UIF9 1905 aaKnown RBP5.96□□□□□ -1.45
CLK3-212ENST00000563418 FHP07954 510 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 OR10A3P58181 314 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TAS2R50P59544 299 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TAS2R60P59551 318 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TOMM34Q15785 309 aaPredicted RBP5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms