RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 NFATC2Q13469 925 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 LKAAEAR1Q8TD35 194 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 HGDQ93099 445 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 DPH2Q9BQC3 489 aaPredicted RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 SARGQ9BW04 601 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 OR51J1Q9H342 316 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 NT5DC2Q9H857 520 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 IL26Q9NPH9 171 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SERHLQ9NQF3 203 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 GPRC5BQ9NZH0 403 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 CTSFQ9UBX1 484 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 MLXQ9UH92 298 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SPATA2Q9UM82 520 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 PLCL2Q9UPR0 1127 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 NPIPB15A6NHN6 443 aaPredicted RBP12.58□□□□□ -0.4
CLK3-206ENST00000562078 SGK494L7N484 410 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 WNT9AO14904 365 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 LANCL1O43813 399 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 KLK8O60259 260 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 NMBP08949 121 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 BPIP17213 487 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 KDELR2P33947 212 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 AVPR1BP47901 424 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 HNMTP50135 292 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 ARHGDIBP52566 201 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 KIAA1024LP59773 190 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 ABHD18Q0P651 414 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 SUSD1Q6UWL2 747 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 CERS6Q6ZMG9 384 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 ZNF730Q6ZMV8 503 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 TMEM91Q6ZNR0 172 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 TRIM69Q86WT6 500 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 TMEM25Q86YD3 366 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 OR10G2Q8NGC3 310 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 CIPCQ9C0C6 399 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 HDHD2Q9H0R4 259 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 CLMPQ9H6B4 373 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 DLL4Q9NR61 685 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 CNOT2Q9NZN8 540 aaKnown RBP12.58□□□□□ -0.4
CLK3-206ENST00000562078 DHRS7Q9Y394 339 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 PCDHB1Q9Y5F3 818 aa12.58□□□□□ -0.4
CLK3-206ENST00000562078 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 RAB19A4D1S5 217 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ZNF7P17097 686 aaPredicted RBP12.57□□□□□ -0.4
CLK3-206ENST00000562078 DDX6P26196 483 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLK3-206ENST00000562078 CSNK1DP48730 415 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 PPP3R1P63098 170 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ADAM15Q13444 863 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 CDKN3Q16667 212 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
CLK3-206ENST00000562078 C22orf39Q6P5X5 142 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 BVESQ8NE79 360 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 SFXN2Q96NB2 322 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 IL4I1Q96RQ9 567 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 NELL2Q99435 816 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 CRLS1Q9UJA2 301 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 PRSS21Q9Y6M0 314 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 TUBAL3A6NHL2 446 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 TNFRSF11BO00300 401 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 DHFRP00374 187 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 SNRPD1P62314 119 aaKnown RBP12.57□□□□□ -0.4
CLK3-206ENST00000562078 CHRNA6Q15825 494 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 PTCHD4Q6ZW05 846 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 C12orf76Q8N812 135 aaPredicted RBP12.57□□□□□ -0.4
CLK3-206ENST00000562078 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 OR9Q2Q8NGE9 314 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ING5Q8WYH8 240 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 OTUB1Q96FW1 271 aaPredicted RBP12.57□□□□□ -0.4
CLK3-206ENST00000562078 LMLNQ96KR4 655 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ZNF382Q96SR6 550 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 C1QTNF3Q9BXJ4 246 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 GPR160Q9UJ42 338 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 RPS6KA6Q9UK32 745 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 TMEM5Q9Y2B1 443 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 C2orf16Q68DN1 1984 aa12.57□□□□□ -0.4
CLK3-206ENST00000562078 EPOPA6NHQ4 379 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 G3V3Q6 166 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 H7C2Y5 167 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 RFXAPO00287 272 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 GPR171O14626 319 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 FFAR3O14843 346 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 GPR42O15529 346 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 ENTPD6O75354 484 aa12.56□□□□□ -0.4
CLK3-206ENST00000562078 NCR1O76036 304 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms