RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HDHD2Q9H0R4 259 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 TRDV1A0A1B0GX56 115 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 INMT-MINDY4F8WBC2 141 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 ICMTO60725 284 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 PRKAG1P54619 331 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 CTBP2P56545 445 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 METAP1DQ6UB28 335 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 LIPIQ6XZB0 460 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 KIF18BQ86Y91 864 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 LRRC56Q8IYG6 542 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 LINC00471Q8N535 108 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 PPP1R16AQ96I34 528 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 DCLRE1CQ96SD1 692 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 SERHL2Q9H4I8 314 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 ASF1AQ9Y294 204 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 PLXND1Q9Y4D7 1925 aa13.18□□□□□ -0.3
VPS9D1-202ENST00000561976 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 PRAMEF27A3QJZ7 478 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CD8B2A6NJW9 211 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 NOS1APO75052 506 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CH25HO95992 272 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SOD1P00441 154 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 LALBAP00709 142 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CTSLP07711 333 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CD8BP10966 210 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 GSTM3P21266 225 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 NNMTP40261 264 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC6A11P48066 632 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ABATP80404 500 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MLLT1Q03111 559 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 INSL4Q14641 139 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 DUSP6Q16828 381 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MINDY4Q4G0A6 757 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SMUG1Q53HV7 270 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SIGIRRQ6IA17 410 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF767PQ75MW2 155 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 FAM109AQ8N4B1 249 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 GTPBP2Q9BX10 602 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC46A2Q9BY10 475 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 TAS2R7Q9NYW3 318 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 NFKBIL1Q9UBC1 381 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CACNB4O00305 520 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC43A1O75387 559 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 LRG1P02750 347 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 WEE1P30291 646 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 EVI2BP34910 448 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ATP6V1E1P36543 226 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SLC1A3P43003 542 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CDH11P55287 796 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 EFNB1P98172 346 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CSTF1Q05048 431 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 NATD1Q8N6N6 113 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MORN4Q8NDC4 146 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 ANGPTL6Q8NI99 470 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 AKAP1Q92667 903 aaKnown RBP eCLIP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MARVELD1Q9BSK0 173 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 PRR14Q9BWN1 585 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 MRPS18AQ9NVS2 196 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 IL36AQ9UHA7 158 aa13.17□□□□□ -0.3
VPS9D1-202ENST00000561976 A0A0G2JN53 185 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 GABRPO00591 440 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 PLOD3O60568 738 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ALDH1A1P00352 501 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 PCBP4P57723 403 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ENTPD8Q5MY95 495 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ADIPOR2Q86V24 386 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 AMIGO1Q86WK6 493 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 OR4F15Q8NGB8 312 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 FGF11Q92914 225 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms