RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ALG3Q92685 438 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 MRPL24Q96A35 216 aaKnown RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 PYCR2Q96C36 320 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 PPP1R2P1Q96PQ5 205 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 GAL3ST4Q96RP7 486 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 ALOXE3Q9BYJ1 711 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 ACTR6Q9GZN1 396 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 PCBD2Q9H0N5 130 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 METTL17Q9H7H0 456 aaPredicted RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 YY1AP1Q9H869 796 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 CISD1Q9NZ45 108 aaKnown RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 MOCS1Q9NZB8 636 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 HEY2Q9UBP5 337 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 SLC2A6Q9UGQ3 507 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 MRPS33Q9Y291 106 aaKnown RBP4.75□□□□□ -1.65
HERC1-213ENST00000561359 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 IKBKGQ9Y6K9 419 aa4.75□□□□□ -1.65
HERC1-213ENST00000561359 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ESYT3A0FGR9 886 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 SYNDIG1LA6NDD5 238 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 DYNC1I1O14576 645 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 SMAD9O15198 467 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 TRIM13O60858 407 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 NDUFS3O75489 264 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ETHE1O95571 254 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 PTMAP06454 111 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 PTMSP20962 102 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 SAT1P21673 171 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 PSMA3P25788 255 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ZFP36P26651 326 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 IMPA1P29218 277 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ATP5DP30049 168 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CDKN2BP42772 138 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 HNRNPFP52597 415 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 TBPL1P62380 186 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 BTN3A2P78410 334 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FUT7Q11130 342 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 GPS1Q13098 491 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 SCGB2A2Q13296 93 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FGFBP1Q14512 234 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 KCNJ11Q14654 390 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CARTPTQ16568 116 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 NTRK2Q16620 822 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ACSBG2Q5FVE4 666 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 NCMAPQ5T1S8 102 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CCDC181Q5TID7 509 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 TIGD3Q6B0B8 471 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ZNF534Q76KX8 674 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 LRRC6Q86X45 466 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 REXO1L1PQ8IX06 675 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 ZNF595Q8IYB9 648 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 OTUD6BQ8N6M0 293 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 BVESQ8NE79 360 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 OR1J4Q8NGS1 313 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 RDH11Q8TC12 318 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 NT5CQ8TCD5 201 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 RHBDF1Q96CC6 855 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CTHRC1Q96CG8 243 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FAR2Q96K12 515 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 TRIM2Q9C040 744 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 NGBQ9NPG2 151 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FANCFQ9NPI8 374 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 TEX10Q9NXF1 929 aaPredicted RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 ARL15Q9NXU5 204 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 CHMP5Q9NZZ3 219 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 UVRAGQ9P2Y5 699 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 FETUBQ9UGM5 382 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 LIMA1Q9UHB6 759 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 LCMT1Q9UIC8 334 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 PTBP2Q9UKA9 531 aaKnown RBP4.74□□□□□ -1.65
HERC1-213ENST00000561359 AMFRQ9UKV5 643 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 DLGAP4Q9Y2H0 992 aa4.74□□□□□ -1.65
HERC1-213ENST00000561359 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 IGHV4-61A0A0C4DH41 118 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 A0A0G2JN53 185 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 TRBC2A0A5B9 178 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 MACROD2A1Z1Q3 448 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 GOLGA6L9A6NEM1 432 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 CAPN14A8MX76 684 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 CDC7O00311 574 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 CD3EAPO15446 510 aaKnown RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 HCRTR2O43614 444 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ZBTB14O43829 449 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 CTNSO60931 367 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 NIPSNAP2O75323 286 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 GAS8O95995 478 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ALDOAP04075 364 aaKnown RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 COX7A2P14406 83 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 FMO4P31512 558 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 NR4A2P43354 598 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 LHX2P50458 406 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 PDLIM4P50479 330 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 CDH11P55287 796 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 RAB38P57729 211 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 FBXW4P57775 412 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 C21orf58P58505 322 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ZNF844Q08AG5 666 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 FOXL1Q12952 345 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms