RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TMEM81Q6P7N7 255 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 NUP54Q7Z3B4 507 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 LACC1Q8IV20 430 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 TNIP2Q8NFZ5 429 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 HGDQ93099 445 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 MTBPQ96DY7 904 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 HSPBAP1Q96EW2 488 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 CNRIP1Q96F85 164 aaPredicted RBP14.82□□□□□ -0.04
SNX1-213ENST00000561026 LCORQ96JN0 433 aaPredicted RBP14.82□□□□□ -0.04
SNX1-213ENST00000561026 TMEM216Q9P0N5 145 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 PLLPQ9Y342 182 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 SLC6A5Q9Y345 797 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 ZNF780BQ9Y6R6 833 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 MTORP42345 2549 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 KDM4EB2RXH2 506 aaPredicted RBP14.81□□□□□ -0.04
SNX1-213ENST00000561026 DVL2O14641 736 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 GNB5O14775 395 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 DLX3O60479 287 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 ABHD2P08910 425 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 BMP7P18075 431 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 DRD5P21918 477 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 BMP5P22003 454 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 PPICP45877 212 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 EMDP50402 254 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 WNT3P56703 355 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 DCAF7P61962 342 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 SNTA1Q13424 505 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 TOMM20Q15388 145 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 LTB4RQ15722 352 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 WIPI1Q5MNZ9 446 aaPredicted RBP14.81□□□□□ -0.04
SNX1-213ENST00000561026 DESI1Q6ICB0 168 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 SLC30A6Q6NXT4 461 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 LCA5Q86VQ0 697 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 RELL2Q8NC24 303 aaPredicted RBP14.81□□□□□ -0.04
SNX1-213ENST00000561026 OR52R1Q8NGF1 315 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 OR1J4Q8NGS1 313 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 OMA1Q96E52 524 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 NODALQ96S42 347 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 ZNF382Q96SR6 550 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 UGT2B28Q9BY64 529 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 HEY2Q9UBP5 337 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 ZNF629Q9UEG4 869 aaPredicted RBP14.81□□□□□ -0.04
SNX1-213ENST00000561026 PRODH2Q9UF12 536 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 FETUBQ9UGM5 382 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 MCM8Q9UJA3 840 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 UTS2RQ9UKP6 389 aa14.81□□□□□ -0.04
SNX1-213ENST00000561026 ARHGAP21Q5T5U3 1957 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 ICOSLGO75144 302 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 ULK1O75385 1050 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 CTAG2O75638 210 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 ESRRBO95718 433 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 IL2RAP01589 272 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 CHN1P15882 459 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 PCSK2P16519 638 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 IMPDH1P20839 514 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 UQCRC1P31930 480 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 PEX19P40855 299 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 KIR2DL3P43628 341 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 NAGLUP54802 743 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 MRPS35P82673 323 aaKnown RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 PLCXD2Q0VAA5 305 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 CSTF3Q12996 717 aaKnown RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 SNTB1Q13884 538 aaKnown RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 FBXL19-AS1Q494R0 122 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 NSUN5P2Q63ZY6 315 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 POMZP3Q6PJE2 187 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 ANGPTL8Q6UXH0 198 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 GPRIN3Q6ZVF9 776 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 ZZZ3Q8IYH5 903 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 GBP7Q8N8V2 638 aaPredicted RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 FAM83FQ8NEG4 500 aaPredicted RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 METTL6Q8TCB7 284 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 NRGNQ92686 78 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 ABTB1Q969K4 478 aaPredicted RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 WDYHV1Q96HA8 205 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 TMEM237Q96Q45 408 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 SH3GL2Q99962 352 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 NFU1Q9UMS0 254 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 CAMK2AQ9UQM7 478 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 DLGAP4Q9Y2H0 992 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 MED13LQ71F56 2210 aa14.8□□□□□ -0.04
SNX1-213ENST00000561026 SETD2Q9BYW2 2564 aaPredicted RBP14.8□□□□□ -0.04
SNX1-213ENST00000561026 AKAP6Q13023 2319 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 CD8B2A6NJW9 211 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 SNPHO15079 494 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 TO15178 435 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 UGT2B11O75310 529 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 RHOXF2BP0C7M4 288 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 DRD2P14416 443 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 ATP5F1P24539 256 aaPredicted RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 DNAJA1P31689 397 aaKnown RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 PTGDSP41222 190 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 PRKAA2P54646 552 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 RIPPLY3P57055 190 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 DCST1Q5T197 706 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 YRDCQ86U90 279 aaKnown RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 CCDC116Q8IYX3 515 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 ZNF675Q8TD23 568 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms